The 2.0 version of rSNPBase

Variant report

Variant rs73281425
Chromosome Location chr12:45677379-45677380
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:45654400-45725600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr12:45662800-45677400 Weak transcription H9 Cell Line embryonic stem cell
3 chr12:45662800-45685400 Weak transcription Primary B cells from peripheral blood blood
4 chr12:45662800-45696800 Weak transcription Primary T cells fromperipheralblood blood
5 chr12:45663000-45677400 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr12:45663000-45677600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr12:45663000-45678200 Weak transcription Fetal Muscle Trunk muscle
8 chr12:45663200-45678400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr12:45663400-45677400 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr12:45663400-45677400 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr12:45663400-45680400 Weak transcription GM12878-XiMat blood
12 chr12:45664000-45678400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr12:45664400-45677600 Weak transcription Fetal Kidney kidney
14 chr12:45666200-45709200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr12:45668000-45677400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr12:45668200-45677400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr12:45668200-45678200 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr12:45668400-45697800 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr12:45668600-45677400 Weak transcription Muscle Satellite Cultured Cells --
20 chr12:45668600-45677600 Weak transcription Spleen Spleen
21 chr12:45668600-45679200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr12:45668600-45693000 Weak transcription Pancreas Pancrea
23 chr12:45668800-45677400 Weak transcription Hela-S3 cervix
24 chr12:45670200-45677400 Weak transcription Colon Smooth Muscle Colon
25 chr12:45670200-45677600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr12:45670200-45677800 Weak transcription HSMMtube muscle
27 chr12:45670200-45680600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr12:45670400-45677600 Weak transcription Stomach Smooth Muscle stomach
29 chr12:45670800-45677600 Weak transcription NHLF lung
30 chr12:45673600-45677800 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr12:45674200-45677400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr12:45674200-45678000 Weak transcription Right Ventricle heart
33 chr12:45674200-45680400 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr12:45674200-45706800 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr12:45674400-45677400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr12:45674400-45677400 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr12:45674400-45679000 Weak transcription Aorta Aorta
38 chr12:45674400-45692200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr12:45674600-45677400 Weak transcription Adipose Nuclei Adipose
40 chr12:45674600-45678400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr12:45674600-45686400 Weak transcription K562 blood
42 chr12:45675000-45680600 Weak transcription Primary hematopoietic stem cells blood
43 chr12:45675200-45680200 Enhancers Fetal Intestine Large intestine
44 chr12:45675400-45679000 Enhancers Duodenum Mucosa Duodenum
45 chr12:45675600-45677600 Weak transcription Fetal Lung lung
46 chr12:45675600-45680200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr12:45675800-45677600 Weak transcription Fetal Heart heart
48 chr12:45675800-45677600 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr12:45675800-45678800 Enhancers Fetal Intestine Small intestine
50 chr12:45675800-45709000 Weak transcription Lung lung

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Last update: Aug 31, 2015