Variant report

Variant	rs73285976
Chromosome Location	chr5:151258174-151258175
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs17112284	0.80[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs56660412	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs59477412	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59891102	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61271148	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs6860343	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs6884436	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs6889290	0.82[AFR][1000 genomes];0.87[AMR][1000 genomes]
rs6896784	0.80[AFR][1000 genomes];0.82[AMR][1000 genomes]
rs7706897	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7707162	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7707359	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1808837	chr5:151238149-151260215	Enhancers Weak transcription	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151235200-151264200	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr5:151256600-151259400	Weak transcription	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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