The 2.0 version of rSNPBase

Variant report

Variant rs73295196
Chromosome Location chr12:48342560-48342561
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:48335800-48346000 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr12:48336600-48343200 Weak transcription Right Ventricle heart
3 chr12:48337800-48343200 Weak transcription Pancreas Pancrea
4 chr12:48338400-48348800 Enhancers HMEC breast
5 chr12:48338800-48343200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
6 chr12:48340400-48344200 Enhancers Esophagus oesophagus
7 chr12:48340800-48343000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr12:48340800-48343000 Weak transcription NHDF-Ad bronchial
9 chr12:48341000-48343000 Weak transcription Muscle Satellite Cultured Cells --
10 chr12:48341000-48343000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr12:48341000-48343000 Weak transcription Fetal Intestine Large intestine
12 chr12:48341000-48343000 Weak transcription A549 lung
13 chr12:48341000-48343000 Weak transcription Osteobl bone
14 chr12:48341000-48343200 Weak transcription Spleen Spleen
15 chr12:48341000-48344200 Enhancers HSMM muscle
16 chr12:48341200-48342800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr12:48341200-48342800 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr12:48341200-48343400 Enhancers NHEK skin
19 chr12:48341200-48343800 Enhancers HSMMtube muscle
20 chr12:48341200-48347600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr12:48341400-48342800 Weak transcription Colonic Mucosa Colon
22 chr12:48341400-48343000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr12:48341400-48343000 Weak transcription Fetal Intestine Small intestine
24 chr12:48341400-48343200 Weak transcription Primary monocytes fromperipheralblood blood
25 chr12:48341400-48343800 Enhancers Fetal Muscle Trunk muscle
26 chr12:48341600-48342800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr12:48341600-48342800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr12:48341600-48342800 Weak transcription Placenta Placenta
29 chr12:48341600-48342800 Weak transcription Hela-S3 cervix
30 chr12:48341600-48342800 Weak transcription NHLF lung
31 chr12:48341600-48343000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr12:48341600-48343400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr12:48341600-48343400 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr12:48341600-48343400 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr12:48341800-48342800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr12:48341800-48343200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr12:48341800-48343600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr12:48341800-48347600 Weak transcription Fetal Lung lung
39 chr12:48342000-48343200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr12:48342200-48343000 Enhancers HepG2 liver
41 chr12:48342200-48343400 Enhancers Fetal Muscle Leg muscle
42 chr12:48342200-48343600 Enhancers Duodenum Mucosa Duodenum
43 chr12:48342200-48346000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr12:48342400-48342600 Enhancers Ovary ovary
45 chr12:48342400-48343000 Enhancers Rectal Mucosa Donor 31 rectum
46 chr12:48342400-48343400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
47 chr12:48342400-48343800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015