Variant report

Variant	rs73296038
Chromosome Location	chr8:91530579-91530580
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs57350729	1.00[AMR][1000 genomes]
rs57820529	0.87[AFR][1000 genomes]
rs57982498	0.87[AFR][1000 genomes]
rs61504138	1.00[AMR][1000 genomes]
rs61509074	1.00[AMR][1000 genomes]
rs73296032	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73296041	1.00[AMR][1000 genomes]
rs73296055	1.00[AMR][1000 genomes]
rs73296065	1.00[AMR][1000 genomes]
rs73299618	1.00[AMR][1000 genomes]
rs73299643	1.00[AMR][1000 genomes]
rs73301525	1.00[AMR][1000 genomes]
rs73301530	1.00[AMR][1000 genomes]
rs73301534	1.00[AMR][1000 genomes]
rs73301557	1.00[AMR][1000 genomes]
rs73301565	1.00[AMR][1000 genomes]
rs73301567	1.00[AMR][1000 genomes]
rs73303521	1.00[AMR][1000 genomes]
rs73303597	1.00[AMR][1000 genomes]
rs73303972	0.87[AFR][1000 genomes]
rs73303973	0.87[AFR][1000 genomes]
rs73303974	0.87[AFR][1000 genomes]
rs73303980	0.87[AFR][1000 genomes]
rs73303981	0.87[AFR][1000 genomes]
rs73303984	0.87[AFR][1000 genomes]
rs73303987	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv981885	chr8:91528144-91537088	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91522000-91532400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr8:91530400-91531000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links