The 2.0 version of rSNPBase

Variant report

Variant rs73296123
Chromosome Location chr12:49162810-49162811
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:49156800-49164400 Weak transcription Fetal Kidney kidney
2 chr12:49157000-49164400 Weak transcription HUVEC blood vessel
3 chr12:49158400-49163400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr12:49158400-49172400 Strong transcription Breast Myoepithelial Primary Cells Breast
5 chr12:49158400-49173200 Strong transcription Fetal Muscle Leg muscle
6 chr12:49158400-49173200 Strong transcription Fetal Stomach stomach
7 chr12:49158400-49173400 Strong transcription Fetal Intestine Small intestine
8 chr12:49158400-49173600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr12:49158400-49177800 Strong transcription Cortex derived primary cultured neurospheres brain
10 chr12:49158600-49163000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr12:49158600-49163000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr12:49158600-49164600 Weak transcription NHEK skin
13 chr12:49158600-49172400 Strong transcription Fetal Intestine Large intestine
14 chr12:49158800-49163400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr12:49158800-49170000 Strong transcription Brain Cingulate Gyrus brain
16 chr12:49159000-49165200 Weak transcription Stomach Mucosa stomach
17 chr12:49159000-49171000 Strong transcription Brain Inferior Temporal Lobe brain
18 chr12:49159000-49172000 Strong transcription Liver Liver
19 chr12:49159200-49163000 Strong transcription Colonic Mucosa Colon
20 chr12:49159200-49172000 Strong transcription Fetal Brain Female brain
21 chr12:49159400-49163000 Strong transcription Sigmoid Colon Sigmoid Colon
22 chr12:49159400-49171600 Strong transcription Stomach Smooth Muscle stomach
23 chr12:49159400-49172000 Strong transcription Rectal Mucosa Donor 31 rectum
24 chr12:49159400-49181000 Weak transcription Small Intestine intestine
25 chr12:49159600-49163600 Strong transcription Rectal Mucosa Donor 29 rectum
26 chr12:49159600-49172600 Strong transcription Brain Germinal Matrix brain
27 chr12:49159600-49174000 Strong transcription Duodenum Mucosa Duodenum
28 chr12:49160000-49163000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr12:49160000-49163000 Genic enhancers Left Ventricle heart
30 chr12:49160200-49164000 Weak transcription NH-A brain
31 chr12:49160400-49163000 Strong transcription Colon Smooth Muscle Colon
32 chr12:49160400-49164000 Weak transcription HMEC breast
33 chr12:49160600-49164200 Weak transcription Primary hematopoietic stem cells blood
34 chr12:49160600-49169000 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr12:49160600-49177400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr12:49160600-49180600 Weak transcription Fetal Brain Male brain
37 chr12:49160800-49163400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr12:49160800-49164400 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr12:49160800-49172000 Strong transcription Placenta Placenta
40 chr12:49161000-49163000 Strong transcription Hela-S3 cervix
41 chr12:49161000-49172600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr12:49161200-49163200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr12:49161200-49163400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr12:49161200-49169600 Strong transcription Fetal Lung lung
45 chr12:49161200-49171600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr12:49161400-49163000 Strong transcription Spleen Spleen
47 chr12:49161400-49164200 Weak transcription NHDF-Ad bronchial
48 chr12:49161400-49171800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr12:49161400-49172200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr12:49161600-49163000 Enhancers HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015