Variant report

Variant	rs73297284
Chromosome Location	chr8:91248552-91248553
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs55892713	1.00[AMR][1000 genomes]
rs56020750	1.00[AMR][1000 genomes]
rs56380820	1.00[AMR][1000 genomes]
rs56763575	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57187918	1.00[AMR][1000 genomes]
rs57640703	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60432986	1.00[AMR][1000 genomes]
rs73297263	0.83[AFR][1000 genomes]
rs73297296	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73310724	0.89[AFR][1000 genomes]
rs73695388	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758164	chr8:91000786-91329669	Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv2759628	chr8:91000786-91329669	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91248000-91248600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:91248000-91248600	Genic enhancers	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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