Variant report

Variant rs73300028
Chromosome Location chr12:51405939-51405940
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51386000-51406600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr12:51386000-51414200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr12:51388600-51406600 Weak transcription Small Intestine intestine
4 chr12:51399000-51406200 Weak transcription Colon Smooth Muscle Colon
5 chr12:51399200-51418000 Weak transcription Gastric stomach
6 chr12:51399400-51408200 Weak transcription NHDF-Ad bronchial
7 chr12:51399800-51406800 Weak transcription A549 lung
8 chr12:51399800-51414600 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr12:51399800-51415600 Weak transcription Right Ventricle heart
10 chr12:51400000-51407200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr12:51400000-51407400 Weak transcription HMEC breast
12 chr12:51401000-51410800 Weak transcription HepG2 liver
13 chr12:51401400-51417800 Weak transcription Stomach Smooth Muscle stomach
14 chr12:51401600-51410000 Weak transcription Pancreas Pancrea
15 chr12:51402000-51418000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr12:51402000-51418000 Weak transcription Fetal Stomach stomach
17 chr12:51402400-51406200 Weak transcription Fetal Lung lung
18 chr12:51402400-51406400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr12:51402400-51407200 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr12:51402400-51407200 Weak transcription Lung lung
21 chr12:51402400-51408600 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr12:51402400-51415600 Weak transcription GM12878-XiMat blood
23 chr12:51402400-51417200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr12:51402400-51417600 Weak transcription Left Ventricle heart
25 chr12:51402400-51418000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr12:51402600-51406400 Enhancers Fetal Brain Male brain
27 chr12:51402600-51406800 Enhancers Cortex derived primary cultured neurospheres brain
28 chr12:51403000-51406600 Weak transcription Fetal Muscle Leg muscle
29 chr12:51403000-51406600 Weak transcription Placenta Placenta
30 chr12:51403000-51418000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr12:51403200-51406200 Weak transcription K562 blood
32 chr12:51403200-51407600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr12:51403400-51407600 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr12:51403400-51415600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr12:51403400-51417600 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr12:51403600-51406000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr12:51403600-51406000 Weak transcription Fetal Heart heart
38 chr12:51403600-51406200 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr12:51403600-51406600 Weak transcription Primary T helper naive cells from peripheral blood blood
40 chr12:51403600-51406600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr12:51403600-51406600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr12:51403600-51406800 Weak transcription Duodenum Mucosa Duodenum
43 chr12:51403600-51407000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr12:51403600-51407400 Enhancers Brain Hippocampus Middle brain
45 chr12:51403600-51407600 Enhancers Primary T helper cells PMA-I stimulated --
46 chr12:51403600-51410200 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr12:51403600-51412000 Weak transcription Fetal Intestine Small intestine
48 chr12:51403600-51414200 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr12:51403600-51414400 Weak transcription Hela-S3 cervix
50 chr12:51403600-51414600 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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