Variant report

Variant	rs73304251
Chromosome Location	chr10:49894887-49894888
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs73304232	1.00[AFR][1000 genomes]
rs73304264	1.00[AFR][1000 genomes]
rs73304269	1.00[AFR][1000 genomes]
rs73304302	1.00[AFR][1000 genomes]
rs73306104	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895371	chr10:49492075-50232180	Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
2	nsv895372	chr10:49576878-49933488	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:49892600-49895400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
2	chr10:49893200-49896000	Active TSS	GM12878-XiMat	blood
3	chr10:49893200-49899000	Weak transcription	Esophagus	oesophagus
4	chr10:49893400-49899000	Weak transcription	Spleen	Spleen
5	chr10:49893600-49898600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr10:49893800-49897400	Enhancers	Primary hematopoietic stem cells	blood
7	chr10:49894000-49895000	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr10:49894000-49901200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr10:49894200-49895000	Enhancers	Fetal Heart	heart
10	chr10:49894200-49895200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr10:49894200-49895200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr10:49894400-49898000	Enhancers	Primary neutrophils fromperipheralblood	blood
13	chr10:49894400-49900000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr10:49894800-49895000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
15	chr10:49894800-49895200	Transcr. at gene 5' and 3'	Primary B cells from cord blood	blood
16	chr10:49894800-49895400	Flanking Active TSS	Primary B cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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