Variant report

Variant	rs73310636
Chromosome Location	chr7:19101968-19101969
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1029435	0.83[AMR][1000 genomes]
rs11975429	0.83[AMR][1000 genomes]
rs11977255	0.83[AMR][1000 genomes]
rs2214313	0.83[AMR][1000 genomes]
rs4358696	0.83[AMR][1000 genomes]
rs4503003	1.00[ASN][1000 genomes]
rs4509204	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59553789	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60986410	0.83[AMR][1000 genomes]
rs73310626	1.00[AMR][1000 genomes]
rs73323566	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531020	chr7:18971153-19261019	Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1032503	chr7:19092460-19134995	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv1032126	chr7:19092460-19137228	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	esv2761116	chr7:19092472-19136307	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	nsv532096	chr7:19094324-19361216	Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats Weak transcription Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:19101200-19102000	Weak transcription	HSMMtube	muscle
2	chr7:19101200-19102200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr7:19101200-19105400	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr7:19101200-19105400	Weak transcription	HSMM	muscle
5	chr7:19101400-19102800	Enhancers	NHDF-Ad	bronchial
6	chr7:19101400-19105200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr7:19101800-19102200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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