Variant report

Variant	rs73310967
Chromosome Location	chr17:38690302-38690303
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:20)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:20 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr17:38689023..38690777-chr17:38705235..38707470,2	MCF-7	breast:
2	chr17:38655284..38659044-chr17:38686692..38691600,6	MCF-7	breast:
3	chr17:38689594..38690625-chr17:38716259..38717126,3	MCF-7	breast:
4	chr17:38603691..38606464-chr17:38689047..38691053,2	MCF-7	breast:
5	chr17:38572042..38574329-chr17:38688910..38690957,2	MCF-7	breast:
6	chr17:38514941..38517306-chr17:38689354..38691130,2	K562	blood:
7	chr17:38597471..38599668-chr17:38689776..38691457,2	K562	blood:
8	chr17:38567583..38575027-chr17:38687434..38693796,7	K562	blood:
9	chr17:38595245..38602220-chr17:38686762..38692136,14	MCF-7	breast:
10	chr17:38685508..38688282-chr17:38688422..38690348,2	MCF-7	breast:
11	chr17:38615426..38618640-chr17:38688722..38692627,3	MCF-7	breast:
12	chr17:38690144..38691765-chr17:38711279..38713760,2	MCF-7	breast:
13	chr17:38597490..38601746-chr17:38686793..38692185,8	MCF-7	breast:
14	chr17:38514587..38516570-chr17:38688574..38692395,3	K562	blood:
15	chr17:38688685..38691278-chr17:38771780..38774213,2	MCF-7	breast:
16	chr17:38519019..38521573-chr17:38688348..38691250,5	K562	blood:
17	chr17:38686790..38691109-chr17:38691407..38694438,4	K562	blood:
18	chr17:38519019..38522951-chr17:38688553..38692204,5	K562	blood:
19	chr17:38504397..38506144-chr17:38688587..38690535,2	K562	blood:
20	chr17:38689494..38692182-chr17:38712855..38714426,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000240125	Chromatin interaction
ENSG00000266208	Chromatin interaction
ENSG00000141753	Chromatin interaction
ENSG00000131747	Chromatin interaction
ENSG00000183153	Chromatin interaction
ENSG00000131746	Chromatin interaction

rs_ID	r²[population]
rs8067193	0.82[EUR][1000 genomes]
rs8067673	0.82[EUR][1000 genomes]
rs9902343	0.85[EUR][1000 genomes]

Chromatin state (count:102 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:38683800-38691000	Enhancers	Primary T helper cells fromperipheralblood	blood
2	chr17:38683800-38691200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
3	chr17:38684200-38691200	Enhancers	Primary T helper naive cells from peripheral blood	blood
4	chr17:38684200-38691200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
5	chr17:38684200-38691400	Enhancers	Primary T killer memory cells from peripheral blood	blood
6	chr17:38684200-38697000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
7	chr17:38685200-38691400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
8	chr17:38686400-38691200	Enhancers	Primary B cells from peripheral blood	blood
9	chr17:38686400-38691200	Enhancers	Osteobl	bone
10	chr17:38686400-38698200	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr17:38686600-38690600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr17:38686600-38690600	Enhancers	HMEC	breast
13	chr17:38686600-38691200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr17:38686600-38692600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr17:38686600-38697200	Enhancers	Fetal Thymus	thymus
16	chr17:38686800-38691000	Enhancers	Thymus	Thymus
17	chr17:38686800-38691200	Enhancers	Primary B cells from cord blood	blood
18	chr17:38687000-38690400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
19	chr17:38687000-38692800	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr17:38687000-38696600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
21	chr17:38687200-38690800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr17:38687200-38691200	Enhancers	Primary T cells fromperipheralblood	blood
23	chr17:38687400-38690600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr17:38687400-38698800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
25	chr17:38687800-38691000	Enhancers	Adipose Nuclei	Adipose
26	chr17:38687800-38691200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr17:38688000-38690600	Enhancers	Rectal Mucosa Donor 29	rectum
28	chr17:38688000-38690600	Enhancers	Rectal Mucosa Donor 31	rectum
29	chr17:38688000-38691400	Enhancers	Skeletal Muscle Male	skeletal muscle
30	chr17:38688000-38692600	Weak transcription	Small Intestine	intestine
31	chr17:38688200-38690600	Enhancers	HUVEC	blood vessel
32	chr17:38688200-38692200	Weak transcription	Esophagus	oesophagus
33	chr17:38688200-38692200	Weak transcription	Right Ventricle	heart
34	chr17:38688200-38692600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr17:38688400-38691000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr17:38688400-38691200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr17:38688600-38690400	Enhancers	Brain Cingulate Gyrus	brain
38	chr17:38688600-38690400	Enhancers	HSMM	muscle
39	chr17:38688600-38690800	Enhancers	Primary hematopoietic stem cells short term culture	blood
40	chr17:38688600-38690800	Enhancers	Muscle Satellite Cultured Cells	--
41	chr17:38688600-38690800	Enhancers	Duodenum Smooth Muscle	Duodenum
42	chr17:38688600-38691000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr17:38688600-38691000	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
44	chr17:38688600-38691000	Enhancers	NHLF	lung
45	chr17:38688600-38691200	Enhancers	NHDF-Ad	bronchial
46	chr17:38688800-38690400	Enhancers	Brain Inferior Temporal Lobe	brain
47	chr17:38688800-38690400	Enhancers	NH-A	brain
48	chr17:38688800-38690800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
49	chr17:38688800-38691000	Enhancers	Spleen	Spleen
50	chr17:38688800-38699000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood

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