Variant report

Variant	rs73315590
Chromosome Location	chr8:119895099-119895100
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs16891617	0.89[AFR][1000 genomes]
rs57721167	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73315578	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73315594	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73315595	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73317507	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73317546	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73317564	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831444	chr8:119757355-119915966	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
2	nsv470234	chr8:119856209-119906530	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv891415	chr8:119886923-119921354	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:119889000-119895200	Enhancers	Hela-S3	cervix
2	chr8:119889600-119895200	Enhancers	NHLF	lung
3	chr8:119893000-119895400	Enhancers	Osteobl	bone
4	chr8:119893400-119895200	Enhancers	HSMMtube	muscle
5	chr8:119893400-119895400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr8:119893800-119895400	Enhancers	HSMM	muscle
7	chr8:119894000-119895200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr8:119894000-119895200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr8:119894800-119897200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr8:119895000-119897400	Weak transcription	NHDF-Ad	bronchial

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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