Variant report

Variant	rs7331727
Chromosome Location	chr13:95085422-95085423
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:95080744..95082315-chr13:95084857..95087137,2	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs57927846	1.00[AMR][1000 genomes]
rs7331791	1.00[AMR][1000 genomes]
rs74103906	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916640	chr13:94521959-95101443	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv533063	chr13:94560362-95101443	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	esv34004	chr13:94906537-95392644	Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95074000-95090600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr13:95078200-95089000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr13:95084200-95086000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr13:95084400-95085800	Enhancers	Fetal Heart	heart
5	chr13:95084400-95086400	Enhancers	Fetal Intestine Large	intestine
6	chr13:95084600-95085800	Weak transcription	Right Atrium	heart
7	chr13:95085000-95085800	Enhancers	K562	blood
8	chr13:95085000-95086000	Weak transcription	Primary B cells from cord blood	blood
9	chr13:95085200-95086200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr13:95085200-95086400	Enhancers	ES-I3 Cell Line	embryonic stem cell
11	chr13:95085400-95085600	Enhancers	Brain Germinal Matrix	brain
12	chr13:95085400-95085600	Bivalent Enhancer	HepG2	liver
13	chr13:95085400-95086000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr13:95085400-95086000	Active TSS	Fetal Intestine Small	intestine
15	chr13:95085400-95086200	Enhancers	Primary B cells from peripheral blood	blood
16	chr13:95085400-95086200	Enhancers	Rectal Mucosa Donor 29	rectum
17	chr13:95085400-95086400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr13:95085400-95086400	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr13:95085400-95086400	Enhancers	HUES64 Cell Line	embryonic stem cell
20	chr13:95085400-95086400	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr13:95085400-95086400	Enhancers	Stomach Mucosa	stomach

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