Variant report

Variant	rs73319080
Chromosome Location	chr14:77978621-77978622
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs17105886	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs45595936	0.83[AMR][1000 genomes]
rs59911628	0.84[EUR][1000 genomes]
rs73319053	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832835	chr14:77906706-78095207	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:121 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:77970200-78047200	Weak transcription	Fetal Heart	heart
2	chr14:77970600-77979200	Strong transcription	HSMM	muscle
3	chr14:77970600-77988600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr14:77970800-77992600	Strong transcription	Monocytes-CD14+_RO01746	blood
5	chr14:77971000-77991400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr14:77971600-77991800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
7	chr14:77972000-77979000	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr14:77972000-78018000	Weak transcription	Hela-S3	cervix
9	chr14:77972200-77991400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr14:77972200-77991600	Strong transcription	Primary B cells from cord blood	blood
11	chr14:77972400-77987000	Weak transcription	Psoas Muscle	Psoas
12	chr14:77972600-77979000	Strong transcription	Duodenum Smooth Muscle	Duodenum
13	chr14:77972600-77979200	Strong transcription	Duodenum Mucosa	Duodenum
14	chr14:77972600-77991400	Strong transcription	Primary B cells from peripheral blood	blood
15	chr14:77972600-77992000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr14:77972800-77979000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
17	chr14:77972800-77979200	Strong transcription	Rectal Mucosa Donor 29	rectum
18	chr14:77972800-77984400	Strong transcription	Primary monocytes fromperipheralblood	blood
19	chr14:77972800-77988200	Strong transcription	Primary T cells from cord blood	blood
20	chr14:77973000-77988600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
21	chr14:77973200-77988600	Strong transcription	Primary T cells fromperipheralblood	blood
22	chr14:77973400-77978800	Strong transcription	Cortex derived primary cultured neurospheres	brain
23	chr14:77974000-77979000	Strong transcription	Liver	Liver
24	chr14:77974000-77989800	Strong transcription	Primary T helper cells fromperipheralblood	blood
25	chr14:77974200-77979000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
26	chr14:77974200-77979600	Strong transcription	Muscle Satellite Cultured Cells	--
27	chr14:77974400-77978800	Strong transcription	HUVEC	blood vessel
28	chr14:77974400-77979000	Strong transcription	Rectal Mucosa Donor 31	rectum
29	chr14:77974600-77980000	Strong transcription	Primary T helper cells PMA-I stimulated	--
30	chr14:77974600-77985000	Strong transcription	Primary hematopoietic stem cells	blood
31	chr14:77975200-77979000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
32	chr14:77975200-77979000	Strong transcription	Osteobl	bone
33	chr14:77975200-77979200	Strong transcription	Adipose Nuclei	Adipose
34	chr14:77975200-77988400	Strong transcription	Primary neutrophils fromperipheralblood	blood
35	chr14:77975400-77979000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr14:77975400-77979000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr14:77975800-77979000	Strong transcription	HepG2	liver
38	chr14:77975800-77990000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr14:77976200-77979000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr14:77976400-77978800	Strong transcription	Brain Inferior Temporal Lobe	brain
41	chr14:77976800-77978800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr14:77976800-77980600	Strong transcription	Fetal Intestine Small	intestine
43	chr14:77976800-77980600	Strong transcription	Spleen	Spleen
44	chr14:77977000-77978800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr14:77977000-77978800	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr14:77977000-77978800	Strong transcription	Left Ventricle	heart
47	chr14:77977000-77978800	Strong transcription	Rectal Smooth Muscle	rectum
48	chr14:77977000-77978800	Strong transcription	NH-A	brain
49	chr14:77977000-77979000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr14:77977000-77979000	Strong transcription	HUES64 Cell Line	embryonic stem cell

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