Variant report

Variant	rs73320067
Chromosome Location	chr5:146103890-146103891
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs60057388	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015804	chr5:146066000-146788233	Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
2	nsv537915	chr5:146066000-146788233	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:146098400-146105600	Weak transcription	Aorta	Aorta
2	chr5:146098600-146104000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr5:146100000-146104200	Weak transcription	Brain Angular Gyrus	brain
4	chr5:146101400-146105600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr5:146101600-146104000	Weak transcription	Fetal Brain Male	brain
6	chr5:146102000-146104600	Weak transcription	Fetal Brain Female	brain
7	chr5:146102000-146105600	Weak transcription	Brain Substantia Nigra	brain
8	chr5:146102200-146104000	Weak transcription	Brain Cingulate Gyrus	brain
9	chr5:146102400-146104200	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr5:146102400-146104400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr5:146102600-146104000	Weak transcription	Brain Anterior Caudate	brain
12	chr5:146102800-146104000	Weak transcription	Brain Hippocampus Middle	brain
13	chr5:146103600-146104000	Weak transcription	Placenta Amnion	Placenta Amnion
14	chr5:146103800-146104200	Weak transcription	Brain Inferior Temporal Lobe	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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