Variant report

Variant	rs73330207
Chromosome Location	chr8:122395077-122395078
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs73330270	1.00[AMR][1000 genomes]
rs73330272	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73330288	1.00[AMR][1000 genomes]
rs73332313	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv465792	chr8:122329373-122398867	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv612131	chr8:122329373-122398867	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv831445	chr8:122336877-122509300	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	esv1808330	chr8:122385614-122415509	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	esv2755780	chr8:122393819-122426819	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv1027842	chr8:122394235-122427343	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:122394200-122395400	Enhancers	Rectal Mucosa Donor 31	rectum
2	chr8:122394200-122396400	Weak transcription	NHDF-Ad	bronchial
3	chr8:122394200-122405200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr8:122394600-122396400	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr8:122394800-122395200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr8:122394800-122395600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
7	chr8:122395000-122395400	Enhancers	Primary neutrophils fromperipheralblood	blood
8	chr8:122395000-122395600	Enhancers	Rectal Mucosa Donor 29	rectum
9	chr8:122395000-122396600	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr8:122395000-122397800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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