Variant report

Variant	rs73338898
Chromosome Location	chr8:126394592-126394593
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:126387457..126389711-chr8:126394500..126396666,2	K562	blood:
2	chr8:126392836..126396701-chr8:126439754..126442098,3	MCF-7	breast:
3	chr8:126391452..126393059-chr8:126393825..126396141,2	K562	blood:
4	chr8:126394324..126395966-chr8:126442137..126444137,2	MCF-7	breast:
5	chr8:126379863..126381491-chr8:126392871..126395195,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000173334	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs57031475	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3410448	chr8:126339813-126418053	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126382400-126396800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr8:126384200-126396000	Weak transcription	HUES48 Cell Line	embryonic stem cell
3	chr8:126384200-126400200	Weak transcription	NHLF	lung
4	chr8:126390000-126398400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr8:126391200-126395000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr8:126391400-126397400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr8:126391400-126397800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr8:126391600-126394600	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr8:126391600-126395800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr8:126391600-126396000	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr8:126391600-126397400	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr8:126391800-126395800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr8:126392000-126396000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr8:126392000-126398200	Weak transcription	HUVEC	blood vessel
15	chr8:126392600-126396000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr8:126392600-126398200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr8:126392800-126396000	Weak transcription	NH-A	brain
18	chr8:126392800-126396800	Weak transcription	Hela-S3	cervix
19	chr8:126392800-126397800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
20	chr8:126392800-126398000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr8:126393200-126395000	Weak transcription	A549	lung
22	chr8:126393200-126398000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr8:126393400-126398200	Weak transcription	Psoas Muscle	Psoas
24	chr8:126393800-126395800	Enhancers	Fetal Thymus	thymus
25	chr8:126393800-126399600	Enhancers	K562	blood
26	chr8:126394200-126395600	Enhancers	Thymus	Thymus
27	chr8:126394200-126397800	Weak transcription	H1 Cell Line	embryonic stem cell

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