Variant report

Variant	rs73359518
Chromosome Location	chr6:11612946-11612947
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:11606661..11609379-chr6:11612276..11614252,3	MCF-7	breast:
2	chr6:11599973..11602605-chr6:11612731..11615608,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000271897	Chromatin interaction

rs_ID	r²[population]
rs1568613	1.00[EUR][1000 genomes]
rs4713592	1.00[EUR][1000 genomes]
rs73359505	1.00[AFR][1000 genomes]
rs73359515	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11607600-11615200	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr6:11608200-11613600	Weak transcription	Rectal Smooth Muscle	rectum
3	chr6:11608200-11615600	Weak transcription	Colon Smooth Muscle	Colon
4	chr6:11608800-11614200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr6:11610000-11613800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr6:11610200-11613600	Enhancers	HUVEC	blood vessel
7	chr6:11610200-11613800	Weak transcription	Stomach Smooth Muscle	stomach
8	chr6:11610200-11631400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr6:11610600-11613200	Weak transcription	Osteobl	bone
10	chr6:11610600-11615600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr6:11610800-11613200	Weak transcription	Hela-S3	cervix
12	chr6:11610800-11613400	Weak transcription	A549	lung
13	chr6:11611000-11613600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr6:11611200-11613000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
15	chr6:11611200-11613000	Weak transcription	Spleen	Spleen
16	chr6:11611200-11613000	Weak transcription	NHLF	lung
17	chr6:11611200-11613200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr6:11611200-11613200	Weak transcription	NH-A	brain
19	chr6:11611200-11613200	Weak transcription	NHDF-Ad	bronchial
20	chr6:11611200-11613600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr6:11611200-11614400	Weak transcription	Placenta	Placenta
22	chr6:11611200-11614800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr6:11611200-11615400	Weak transcription	Lung	lung
24	chr6:11611200-11616400	Weak transcription	Left Ventricle	heart
25	chr6:11611200-11616400	Weak transcription	Ovary	ovary
26	chr6:11611200-11616400	Weak transcription	Psoas Muscle	Psoas
27	chr6:11611200-11622600	Weak transcription	Fetal Muscle Leg	muscle
28	chr6:11611400-11613800	Weak transcription	Adipose Nuclei	Adipose
29	chr6:11612200-11615000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr6:11612400-11613800	Genic enhancers	HSMM	muscle
31	chr6:11612400-11616400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr6:11612600-11615200	Enhancers	Muscle Satellite Cultured Cells	--
33	chr6:11612800-11613200	Weak transcription	Placenta Amnion	Placenta Amnion
34	chr6:11612800-11617000	Enhancers	HSMMtube	muscle

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