Variant report

Variant	rs73361705
Chromosome Location	chr7:70610775-70610776
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1990109	1.00[EUR][1000 genomes]
rs56952698	1.00[EUR][1000 genomes]
rs73361710	1.00[EUR][1000 genomes]
rs73361711	1.00[EUR][1000 genomes]
rs73361724	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73361727	1.00[EUR][1000 genomes]
rs73361731	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv519090	chr7:70085934-71071896	Weak transcription Enhancers Bivalent/Poised TSS Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
2	nsv1034662	chr7:70275712-70722953	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1015261	chr7:70404302-71255933	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:70598600-70611200	Weak transcription	Right Atrium	heart
2	chr7:70598800-70611200	Weak transcription	Colon Smooth Muscle	Colon
3	chr7:70599000-70611000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr7:70599600-70611400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr7:70601000-70613600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
6	chr7:70605600-70610800	Weak transcription	Fetal Muscle Leg	muscle
7	chr7:70605600-70611000	Weak transcription	Left Ventricle	heart
8	chr7:70605600-70611200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr7:70605800-70610800	Weak transcription	Fetal Muscle Trunk	muscle
10	chr7:70606000-70611000	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr7:70606000-70611000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr7:70606200-70611200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr7:70606600-70611000	Weak transcription	HUES48 Cell Line	embryonic stem cell
14	chr7:70606600-70611000	Weak transcription	Fetal Lung	lung
15	chr7:70607600-70610800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr7:70607600-70611000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr7:70608800-70611800	Weak transcription	Aorta	Aorta
18	chr7:70609400-70611000	Weak transcription	H1 Cell Line	embryonic stem cell
19	chr7:70609600-70611000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr7:70609600-70611000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr7:70609800-70611200	Weak transcription	Fetal Stomach	stomach
22	chr7:70610000-70611200	Weak transcription	HUES6 Cell Line	embryonic stem cell
23	chr7:70610000-70611200	Weak transcription	HUES64 Cell Line	embryonic stem cell
24	chr7:70610000-70612200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr7:70610200-70611800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr7:70610400-70610800	Weak transcription	Ovary	ovary
27	chr7:70610400-70611000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr7:70610600-70611600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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