Variant report

Variant rs73363050
Chromosome Location chr6:5192197-5192198
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5175800-5193400 Weak transcription Brain Substantia Nigra brain
2 chr6:5176200-5192400 Weak transcription Fetal Muscle Trunk muscle
3 chr6:5176200-5201200 Weak transcription Fetal Muscle Leg muscle
4 chr6:5176200-5203600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr6:5176200-5239600 Weak transcription Thymus Thymus
6 chr6:5177800-5205200 Weak transcription Aorta Aorta
7 chr6:5179200-5207600 Weak transcription Primary B cells from cord blood blood
8 chr6:5180000-5201000 Weak transcription Stomach Smooth Muscle stomach
9 chr6:5180200-5212200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr6:5180400-5193200 Weak transcription Brain Inferior Temporal Lobe brain
11 chr6:5180600-5192600 Weak transcription Brain Angular Gyrus brain
12 chr6:5180600-5195800 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr6:5180600-5205000 Weak transcription Primary hematopoietic stem cells blood
14 chr6:5180600-5205800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr6:5180600-5208200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr6:5181200-5204600 Weak transcription Esophagus oesophagus
17 chr6:5182000-5196200 Weak transcription Pancreas Pancrea
18 chr6:5182000-5213600 Weak transcription Gastric stomach
19 chr6:5182200-5200000 Weak transcription Left Ventricle heart
20 chr6:5184200-5192600 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr6:5186000-5192400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr6:5186400-5193600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr6:5186400-5195800 Weak transcription K562 blood
24 chr6:5186400-5205000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr6:5186600-5196200 Weak transcription Fetal Stomach stomach
26 chr6:5186600-5200400 Weak transcription Right Ventricle heart
27 chr6:5186600-5202600 Weak transcription Primary T cells from cord blood blood
28 chr6:5187200-5194000 Enhancers Fetal Adrenal Gland Adrenal Gland
29 chr6:5189000-5213200 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr6:5189400-5205400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr6:5189800-5192200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:5189800-5194000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
33 chr6:5190200-5192600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr6:5190400-5192600 Enhancers Muscle Satellite Cultured Cells --
35 chr6:5190600-5192800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr6:5190800-5192600 Enhancers Fetal Lung lung
37 chr6:5190800-5192800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
38 chr6:5191000-5192200 Weak transcription Primary monocytes fromperipheralblood blood
39 chr6:5191000-5202400 Weak transcription Dnd41 blood
40 chr6:5191000-5206600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr6:5191200-5192200 Genic enhancers HepG2 liver
42 chr6:5191200-5192600 Weak transcription Brain Hippocampus Middle brain
43 chr6:5191200-5193200 Weak transcription Brain Cingulate Gyrus brain
44 chr6:5191200-5193200 Weak transcription Fetal Heart heart
45 chr6:5191200-5196200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr6:5191200-5201400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr6:5191200-5202400 Weak transcription HMEC breast
48 chr6:5191400-5192200 Enhancers Fetal Intestine Small intestine
49 chr6:5191400-5192200 Flanking Active TSS GM12878-XiMat blood
50 chr6:5191400-5193000 Enhancers Placenta Placenta

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