The 2.0 version of rSNPBase

Variant report

Variant rs73363543
Chromosome Location chr21:17942821-17942822
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:17910200-17943200 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr21:17925400-17960400 Weak transcription Esophagus oesophagus
3 chr21:17927200-17950200 Weak transcription Fetal Lung lung
4 chr21:17927200-17950800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
5 chr21:17934600-17958600 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr21:17936400-17950400 Weak transcription Adipose Nuclei Adipose
7 chr21:17936400-17951600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr21:17936600-17943200 Weak transcription Ovary ovary
9 chr21:17936600-17951400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr21:17936600-17951400 Weak transcription Left Ventricle heart
11 chr21:17936800-17959400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr21:17940800-17943200 Enhancers Hela-S3 cervix
13 chr21:17941000-17943000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr21:17941000-17943200 Enhancers Muscle Satellite Cultured Cells --
15 chr21:17941200-17947000 Enhancers HSMM muscle
16 chr21:17941200-17951800 Weak transcription Fetal Kidney kidney
17 chr21:17941400-17943000 Enhancers HUES48 Cell Line embryonic stem cell
18 chr21:17941600-17943000 Weak transcription Aorta Aorta
19 chr21:17941600-17944000 Enhancers HUES64 Cell Line embryonic stem cell
20 chr21:17941800-17943000 Enhancers iPS-15b Cell Line embryonic stem cell
21 chr21:17941800-17946600 Enhancers NH-A brain
22 chr21:17942000-17943000 Enhancers Brain Inferior Temporal Lobe brain
23 chr21:17942000-17943400 Enhancers Brain Cingulate Gyrus brain
24 chr21:17942000-17943400 Enhancers Duodenum Smooth Muscle Duodenum
25 chr21:17942000-17943600 Enhancers Brain Hippocampus Middle brain
26 chr21:17942000-17943600 Enhancers Placenta Amnion Placenta Amnion
27 chr21:17942000-17943800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr21:17942000-17944000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr21:17942000-17944200 Enhancers HMEC breast
30 chr21:17942000-17944600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr21:17942200-17943200 Weak transcription Colon Smooth Muscle Colon
32 chr21:17942200-17945800 Weak transcription Right Ventricle heart
33 chr21:17942200-17950600 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr21:17942400-17943400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr21:17942400-17943400 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr21:17942400-17943400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr21:17942400-17943400 Weak transcription HSMMtube muscle
38 chr21:17942400-17945600 Weak transcription NHDF-Ad bronchial
39 chr21:17942600-17943000 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr21:17942600-17943800 Enhancers Rectal Smooth Muscle rectum
41 chr21:17942800-17943000 Enhancers Cortex derived primary cultured neurospheres brain
42 chr21:17942800-17943000 Active TSS A549 lung
43 chr21:17942800-17943200 Enhancers Osteobl bone
44 chr21:17942800-17943600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
45 chr21:17942800-17944400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr21:17942800-17945000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015