Variant report

Variant	rs73371005
Chromosome Location	chr7:80146850-80146851
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10241126	0.90[EUR][1000 genomes]
rs10250561	0.90[EUR][1000 genomes]
rs10257864	0.90[EUR][1000 genomes]
rs10258421	0.90[EUR][1000 genomes]
rs10258426	0.90[EUR][1000 genomes]
rs10268151	0.90[EUR][1000 genomes]
rs10268450	0.90[EUR][1000 genomes]
rs11975442	0.90[EUR][1000 genomes]
rs11978272	0.90[EUR][1000 genomes]
rs11979641	0.90[EUR][1000 genomes]
rs11982052	0.90[EUR][1000 genomes]
rs28671281	0.90[EUR][1000 genomes]
rs4563810	0.89[EUR][1000 genomes]
rs57988109	0.90[EUR][1000 genomes]
rs73369030	0.90[EUR][1000 genomes]
rs73369032	0.90[EUR][1000 genomes]
rs73369081	0.90[EUR][1000 genomes]
rs7783668	0.90[EUR][1000 genomes]
rs7796785	0.90[EUR][1000 genomes]
rs7803173	1.00[EUR][1000 genomes]
rs7809064	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429785	chr7:79589749-80177049	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv1030961	chr7:80032525-80197468	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv538991	chr7:80032525-80197468	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv949205	chr7:80039695-80211200	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv888524	chr7:80107798-80723062	Active TSS Strong transcription Enhancers Genic enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
6	nsv831043	chr7:80119414-80322092	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
7	nsv948605	chr7:80119690-80298887	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
8	nsv1020682	chr7:80120651-80297697	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
9	esv1801415	chr7:80130554-80149152	Weak transcription Enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:80129200-80147800	Weak transcription	Left Ventricle	heart
2	chr7:80144400-80147000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr7:80144400-80147200	Enhancers	Adipose Nuclei	Adipose
4	chr7:80146000-80147000	Enhancers	Fetal Intestine Large	intestine
5	chr7:80146000-80147200	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr7:80146000-80147200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr7:80146200-80147000	Enhancers	Fetal Intestine Small	intestine
8	chr7:80146200-80147000	Enhancers	NHDF-Ad	bronchial
9	chr7:80146200-80147200	Enhancers	Monocytes-CD14+_RO01746	blood
10	chr7:80146400-80147000	Enhancers	Fetal Heart	heart
11	chr7:80146400-80147000	Enhancers	Small Intestine	intestine
12	chr7:80146400-80147000	Enhancers	Stomach Mucosa	stomach
13	chr7:80146400-80147000	Enhancers	Spleen	Spleen
14	chr7:80146400-80147200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr7:80146800-80147000	Enhancers	Placenta	Placenta
16	chr7:80146800-80147400	Enhancers	Fetal Lung	lung
17	chr7:80146800-80149000	Weak transcription	Duodenum Mucosa	Duodenum

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