Variant report

Variant	rs73377526
Chromosome Location	chr10:117424380-117424381
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:36)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:36 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:117423923..117424844-chr10:117679344..117680263,5	MCF-7	breast:
2	chr10:117423943..117424823-chr10:117839818..117840726,5	MCF-7	breast:
3	chr10:117191636..117192147-chr10:117423926..117424438,2	MCF-7	breast:
4	chr10:117423945..117424825-chr10:117465337..117466184,3	MCF-7	breast:
5	chr10:117330704..117334059-chr10:117422669..117426384,3	MCF-7	breast:
6	chr10:117423889..117424875-chr10:117757387..117758382,5	MCF-7	breast:
7	chr10:117424325..117424852-chr10:117902573..117903121,2	MCF-7	breast:
8	chr10:117423870..117424874-chr10:117902617..117903573,9	MCF-7	breast:
9	chr10:117424018..117424810-chr8:129153870..129154532,2	MCF-7	breast:
10	chr10:117423917..117424881-chr10:117467818..117468687,3	MCF-7	breast:
11	chr10:117424216..117424769-chr10:117840176..117840998,2	MCF-7	breast:
12	chr10:117191638..117193198-chr10:117423900..117424920,8	MCF-7	breast:
13	chr10:117191291..117192435-chr10:117423930..117424818,4	MCF-7	breast:
14	chr10:117191105..117195463-chr10:117420913..117426714,6	MCF-7	breast:
15	chr10:117412730..117413781-chr10:117423900..117424839,9	MCF-7	breast:
16	chr10:117421992..117426974-chr10:117467118..117472405,7	MCF-7	breast:
17	chr10:117191917..117192465-chr10:117424116..117424826,2	MCF-7	breast:
18	chr10:117423894..117424788-chr10:117902727..117903483,6	MCF-7	breast:
19	chr10:117424366..117424869-chr13:58538442..58538962,2	MCF-7	breast:
20	chr10:117421922..117426738-chr10:118029983..118035874,10	MCF-7	breast:
21	chr10:117424165..117428344-chr10:117465614..117471494,6	MCF-7	breast:
22	chr10:117424049..117424879-chr10:117469437..117470056,3	MCF-7	breast:
23	chr10:117423885..117424482-chr10:117467306..117467825,2	MCF-7	breast:
24	chr10:117423967..117424843-chr10:117468066..117468659,2	MCF-7	breast:
25	chr10:117423951..117424749-chr10:117902548..117903357,2	MCF-7	breast:
26	chr10:117423923..117424776-chr10:117679621..117680263,4	MCF-7	breast:
27	chr10:117423953..117424875-chr10:117757387..117758382,3	MCF-7	breast:
28	chr10:117412874..117413803-chr10:117423940..117424832,5	MCF-7	breast:
29	chr10:117421405..117427759-chr10:118027934..118034540,13	MCF-7	breast:
30	chr10:117424047..117424823-chr10:117839860..117840726,4	MCF-7	breast:
31	chr10:117423127..117425169-chr10:117426970..117428635,2	MCF-7	breast:
32	chr10:117191638..117192763-chr10:117423900..117424920,6	MCF-7	breast:
33	chr10:117412730..117413781-chr10:117423900..117424839,7	MCF-7	breast:
34	chr10:117423965..117424797-chr10:117464767..117465273,2	MCF-7	breast:
35	chr10:117424022..117424879-chr10:117469437..117470299,2	MCF-7	breast:
36	chr10:117423907..117424465-chr10:117639294..117640065,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000151892	Chromatin interaction

rs_ID	r²[population]
rs11197398	0.90[AFR][1000 genomes]
rs17093329	0.83[ASN][1000 genomes]
rs17093331	0.83[ASN][1000 genomes]
rs17093333	0.83[ASN][1000 genomes]
rs17093335	0.83[ASN][1000 genomes]
rs17093399	0.90[ASN][1000 genomes]
rs74158208	0.88[ASN][1000 genomes]

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117423200-117425800	Enhancers	Muscle Satellite Cultured Cells	--
2	chr10:117423800-117425800	Weak transcription	HSMM	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links