Variant report

Variant	rs73379058
Chromosome Location	chr21:45230386-45230387
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:67)
CpG islands
(count:0)
Chromatin interactive
region (count:20)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:67 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	USF1	chr21:45230053-45230965	H1-hESC	embryonic stem cell:	n/a	chr21:45230346-45230357
2	USF2	chr21:45229727-45231304	GM12878	blood:	n/a	n/a
3	POLR2A	chr21:45227444-45233850	K562	blood:	n/a	n/a
4	POLR2A	chr21:45227484-45232123	K562	blood:	n/a	n/a
5	CTCF	chr21:45230377-45231428	HCT-116	colon:	n/a	n/a
6	USF1	chr21:45230024-45230573	H1-hESC	embryonic stem cell:	n/a	chr21:45230346-45230357
7	POLR2A	chr21:45230175-45231138	H1-hESC	embryonic stem cell:	n/a	n/a
8	MYC	chr21:45230373-45230984	K562	blood:	n/a	n/a
9	POLR2A	chr21:45229747-45231321	GM12878	blood:	n/a	n/a
10	USF1	chr21:45230154-45230646	GM12878	blood:	n/a	chr21:45230346-45230357
11	MAX	chr21:45230377-45231114	GM12878	blood:	n/a	n/a
12	MYC	chr21:45230382-45230919	MCF-7	breast:	n/a	n/a
13	POLR2A	chr21:45228301-45231287	GM12891	blood:	n/a	n/a
14	POLR2A	chr21:45227443-45231720	GM12892	blood:	n/a	n/a
15	POLR2A	chr21:45228765-45232382	GM12891	blood:	n/a	n/a
16	RCOR1	chr21:45230373-45231078	K562	blood:	n/a	n/a
17	EGR1	chr21:45230206-45230891	K562	blood:	n/a	n/a
18	CHD2	chr21:45230350-45231092	K562	blood:	n/a	n/a
19	ZBTB7A	chr21:45230255-45230447	K562	blood:	n/a	n/a
20	POLR2A	chr21:45230191-45231176	Hela-S3	cervix:	n/a	n/a
21	POU2F2	chr21:45230151-45231064	GM12878	blood:	n/a	n/a
22	USF1	chr21:45230031-45230628	K562	blood:	n/a	chr21:45230346-45230357
23	POLR2A	chr21:45230177-45231053	GM12892	blood:	n/a	n/a
24	ATF3	chr21:45230203-45230542	K562	blood:	n/a	n/a
25	USF2	chr21:45230248-45230928	H1-hESC	embryonic stem cell:	n/a	n/a
26	POLR2A	chr21:45230114-45231245	GM12878	blood:	n/a	n/a
27	POLR2A	chr21:45229795-45230422	A549	lung:	n/a	n/a
28	HDAC2	chr21:45230215-45230653	K562	blood:	n/a	n/a
29	CTCF	chr21:45230287-45231376	SK-N-SH	brain:	n/a	n/a
30	POLR2A	chr21:45230042-45230945	H1-hESC	embryonic stem cell:	n/a	n/a
31	NR2F2	chr21:45229936-45231263	MCF-7	breast:	n/a	n/a
32	POLR2A	chr21:45227647-45232825	Hela-S3	cervix:	n/a	n/a
33	USF1	chr21:45230165-45230661	K562	blood:	n/a	chr21:45230346-45230357
34	POLR2A	chr21:45230058-45231562	K562	blood:	n/a	n/a
35	POLR2A	chr21:45230020-45231067	Hela-S3	cervix:	n/a	n/a
36	POLR2A	chr21:45227502-45231576	GM12878	blood:	n/a	n/a
37	MAX	chr21:45230232-45231234	MCF-7	breast:	n/a	n/a
38	NR2F2	chr21:45230088-45231141	K562	blood:	n/a	n/a
39	POLR2A	chr21:45230340-45231330	HL-60	blood:	n/a	n/a
40	POLR2A	chr21:45229763-45231511	GM12878	blood:	n/a	n/a
41	MYC	chr21:45230370-45231042	K562	blood:	n/a	n/a
42	USF1	chr21:45230188-45230641	GM12878	blood:	n/a	chr21:45230346-45230357
43	CTCF	chr21:45230290-45231020	GM12892	blood:	n/a	n/a
44	NR2F2	chr21:45230051-45231235	K562	blood:	n/a	n/a
45	CTCF	chr21:45230280-45230430	K562	blood:	n/a	n/a
46	POLR2A	chr21:45228459-45231128	K562	blood:	n/a	n/a
47	POU2F2	chr21:45230330-45231086	GM12891	blood:	n/a	n/a
48	USF2	chr21:45230257-45230475	K562	blood:	n/a	n/a
49	MAZ	chr21:45230352-45231700	K562	blood:	n/a	n/a
50	POLR2A	chr21:45229502-45231108	K562	blood:	n/a	n/a

No data

(count:20 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr21:45226367..45233141-chr21:45284145..45288607,11	K562	blood:
2	chr21:45228155..45231014-chr21:45339166..45342042,3	K562	blood:
3	chr21:45229004..45230702-chr21:45230841..45232657,2	MCF-7	breast:
4	chr21:45210899..45216228-chr21:45227595..45230862,5	MCF-7	breast:
5	chr21:45230314..45231521-chr21:45358032..45359692,17	K562	blood:
6	chr21:45230338..45231005-chr21:45249127..45250028,2	MCF-7	breast:
7	chr21:45230369..45231282-chr21:45395339..45396518,7	MCF-7	breast:
8	chr21:45230251..45231814-chr21:45414241..45416500,2	K562	blood:
9	chr21:45226284..45237567-chr21:45281864..45289573,19	K562	blood:
10	chr21:45228592..45232844-chr21:45283509..45286625,5	MCF-7	breast:
11	chr21:45228584..45234568-chr21:45342221..45347972,7	K562	blood:
12	chr21:45209190..45209944-chr21:45230362..45230868,2	K562	blood:
13	chr21:45230337..45232483-chr21:45365596..45368025,2	K562	blood:
14	chr21:45230328..45230908-chr21:45327950..45328510,2	MCF-7	breast:
15	chr21:45230354..45231265-chr21:45395061..45396060,7	K562	blood:
16	chr21:45229749..45232080-chr21:45430603..45432486,2	K562	blood:
17	chr21:45230367..45231197-chr21:45361732..45362367,2	K562	blood:
18	chr21:45156182..45158069-chr21:45230385..45232004,2	K562	blood:
19	chr21:45230381..45231220-chr21:45557530..45558478,3	MCF-7	breast:
20	chr21:45230307..45231804-chr21:45394981..45396219,10	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CSTB-1	chr21:45230112-45230404	XLOC_014107

No data

Variant related genes	Relation type
ENSG00000215458	TF binding region
ENSG00000199598	Chromatin interaction
ENSG00000160214	Chromatin interaction
ENSG00000160216	Chromatin interaction
ENSG00000160218	Chromatin interaction
ENSG00000252606	Chromatin interaction
ENSG00000215458	Chromatin interaction

Extended variants
information (count: 83 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:60)

rs_ID	r²[population]
rs2070536	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2070540	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2073431	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2276244	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2838365	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2838369	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2838374	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2838377	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2838381	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2838382	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2838383	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2838388	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2838389	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2838390	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2838403	0.84[ASN][1000 genomes]
rs2838406	0.80[ASN][1000 genomes]
rs2838408	0.80[ASN][1000 genomes]
rs2838410	0.80[ASN][1000 genomes]
rs2838415	1.00[AMR][1000 genomes]
rs2838417	1.00[AMR][1000 genomes]
rs2838418	1.00[AMR][1000 genomes]
rs28691645	0.83[ASN][1000 genomes]
rs34016850	0.80[ASN][1000 genomes]
rs34746583	0.84[ASN][1000 genomes]
rs3819607	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3819608	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3819613	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3819615	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs57450235	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58078050	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58464891	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59461641	0.92[ASN][1000 genomes]
rs61514222	1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62229220	0.83[ASN][1000 genomes]
rs62229224	0.92[ASN][1000 genomes]
rs62229227	0.92[ASN][1000 genomes]
rs62229228	0.92[ASN][1000 genomes]
rs66472331	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66829381	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs66850181	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67002472	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67083338	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67127915	0.92[ASN][1000 genomes]
rs67157971	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs67443123	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67883823	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73224966	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73224970	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73224973	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73224979	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs73224984	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73224988	0.83[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs73367288	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73367302	1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73379004	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73379033	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73379037	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73379050	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73379055	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9981647	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531545	chr21:45095397-45395904	Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
2	nsv913876	chr21:45119629-45267193	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
3	esv2830066	chr21:45133868-45258047	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
4	nsv913879	chr21:45145286-45237039	Genic enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
5	nsv913880	chr21:45145286-45263920	Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
6	nsv913881	chr21:45145286-45267193	Flanking Active TSS Strong transcription Active TSS Weak transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
7	nsv470904	chr21:45151045-45258047	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
8	nsv913882	chr21:45151874-45370715	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
9	nsv834107	chr21:45155325-45294546	Enhancers Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Strong transcription Weak transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
10	esv33817	chr21:45169412-46031810	Weak transcription Bivalent/Poised TSS Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	121 gene(s)	inside rSNPs	diseases
11	nsv520305	chr21:45175958-45246326	Strong transcription Genic enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
12	nsv834108	chr21:45178037-45369641	Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
13	nsv913883	chr21:45191139-45252838	Weak transcription Strong transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
14	nsv913884	chr21:45191139-45255836	Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
15	nsv544469	chr21:45194085-45257959	Active TSS Genic enhancers Flanking Bivalent TSS/Enh Weak transcription Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
16	nsv913885	chr21:45206355-45249474	Weak transcription Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
17	nsv587718	chr21:45210932-45252838	Flanking Bivalent TSS/Enh Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
18	nsv1065007	chr21:45212880-45257959	Weak transcription Enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
19	nsv544470	chr21:45212880-45257959	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
20	nsv459292	chr21:45218440-45269841	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
21	nsv587719	chr21:45218440-45269841	Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
22	nsv522204	chr21:45220483-45246326	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
23	nsv913886	chr21:45220483-45267193	Active TSS Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:120 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:45211000-45230400	Weak transcription	Stomach Mucosa	stomach
2	chr21:45211000-45257200	Weak transcription	Right Atrium	heart
3	chr21:45211200-45230600	Weak transcription	Fetal Brain Male	brain
4	chr21:45215400-45230800	Weak transcription	Small Intestine	intestine
5	chr21:45217600-45230600	Weak transcription	NHDF-Ad	bronchial
6	chr21:45218400-45230600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr21:45218800-45230600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
8	chr21:45219400-45230600	Weak transcription	HUVEC	blood vessel
9	chr21:45219600-45230400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
10	chr21:45221800-45230600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr21:45221800-45234200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr21:45222000-45230800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr21:45222400-45230800	Weak transcription	NH-A	brain
14	chr21:45223200-45231000	Weak transcription	HSMM	muscle
15	chr21:45223400-45230600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr21:45223400-45230800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
17	chr21:45223400-45230800	Weak transcription	Rectal Smooth Muscle	rectum
18	chr21:45223600-45230600	Weak transcription	Brain Angular Gyrus	brain
19	chr21:45223600-45231000	Weak transcription	Psoas Muscle	Psoas
20	chr21:45223800-45230400	Weak transcription	Primary T helper cells PMA-I stimulated	--
21	chr21:45223800-45230400	Weak transcription	Colon Smooth Muscle	Colon
22	chr21:45224000-45230600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
23	chr21:45224000-45230600	Weak transcription	Muscle Satellite Cultured Cells	--
24	chr21:45224000-45230600	Weak transcription	Rectal Mucosa Donor 31	rectum
25	chr21:45224200-45230600	Weak transcription	Primary T helper cells fromperipheralblood	blood
26	chr21:45224200-45230600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr21:45224200-45230600	Weak transcription	Fetal Lung	lung
28	chr21:45224200-45230800	Weak transcription	Osteobl	bone
29	chr21:45224400-45230400	Weak transcription	Brain Cingulate Gyrus	brain
30	chr21:45224400-45230400	Weak transcription	Rectal Mucosa Donor 29	rectum
31	chr21:45224600-45230400	Weak transcription	Primary T cells fromperipheralblood	blood
32	chr21:45224600-45230600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
33	chr21:45224600-45230600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
34	chr21:45224600-45230600	Weak transcription	Brain Substantia Nigra	brain
35	chr21:45224600-45230600	Weak transcription	Left Ventricle	heart
36	chr21:45224600-45231000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
37	chr21:45224600-45232200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
38	chr21:45224600-45234600	Weak transcription	Hela-S3	cervix
39	chr21:45224800-45230600	Weak transcription	Brain Hippocampus Middle	brain
40	chr21:45224800-45230600	Weak transcription	Duodenum Smooth Muscle	Duodenum
41	chr21:45224800-45230600	Weak transcription	Sigmoid Colon	Sigmoid Colon
42	chr21:45224800-45231000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr21:45224800-45234200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr21:45224800-45238400	Weak transcription	Aorta	Aorta
45	chr21:45225000-45230400	Weak transcription	Right Ventricle	heart
46	chr21:45225000-45230600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
47	chr21:45225800-45230400	Weak transcription	Fetal Intestine Large	intestine
48	chr21:45226000-45230400	Weak transcription	Pancreas	Pancrea
49	chr21:45226200-45230400	Weak transcription	Duodenum Mucosa	Duodenum
50	chr21:45226200-45230600	Weak transcription	A549	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links