Variant report

Variant	rs73380007
Chromosome Location	chr21:37918035-37918036
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11700928	0.94[AMR][1000 genomes]
rs11702700	0.94[AMR][1000 genomes]
rs16997926	0.94[AMR][1000 genomes]
rs7279272	0.94[AMR][1000 genomes]
rs73380031	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8126947	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs8134335	0.84[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834090	chr21:37812545-38009542	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv1064290	chr21:37878964-37983133	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:37915200-37921600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr21:37915600-37919800	Enhancers	Liver	Liver
3	chr21:37915600-37921600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr21:37915800-37922000	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr21:37915800-37924800	Weak transcription	Right Atrium	heart
6	chr21:37916400-37918800	Enhancers	Ovary	ovary
7	chr21:37916600-37918400	Bivalent Enhancer	Fetal Muscle Leg	muscle
8	chr21:37916600-37920200	Enhancers	Fetal Lung	lung
9	chr21:37916600-37922000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr21:37917600-37921800	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr21:37917800-37919200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr21:37918000-37918200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
13	chr21:37918000-37918800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr21:37918000-37919000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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