| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv530929 |
chr9:1998911-2925112 |
Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
39 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1017581 |
chr9:2494815-3172020 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
27 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv539934 |
chr9:2494815-3172020 |
Strong transcription Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
27 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv892079 |
chr9:2681430-2931341 |
Weak transcription Enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
14 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv1024262 |
chr9:2703159-3067931 |
Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv892084 |
chr9:2853103-2909883 |
Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv1019892 |
chr9:2904217-2932528 |
Weak transcription Enhancers Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv539937 |
chr9:2904217-2932528 |
Enhancers Weak transcription Bivalent Enhancer
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv1026349 |
chr9:2904217-2939960 |
Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 10 |
nsv539938 |
chr9:2904217-2939960 |
Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
