The 2.0 version of rSNPBase

Variant report

Variant rs7338478
Chromosome Location chr13:95922393-95922394
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:95880600-95922600 Weak transcription Psoas Muscle Psoas
2 chr13:95896200-95923400 Weak transcription Ovary ovary
3 chr13:95897000-95927400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr13:95908000-95926600 Weak transcription Gastric stomach
5 chr13:95910200-95927400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr13:95913600-95932800 Weak transcription Primary B cells from peripheral blood blood
7 chr13:95917000-95931400 Weak transcription H1 Cell Line embryonic stem cell
8 chr13:95918400-95923400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
9 chr13:95918800-95922800 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr13:95919000-95922600 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr13:95919000-95922800 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr13:95919000-95923200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr13:95919000-95925600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr13:95919000-95930000 Weak transcription Esophagus oesophagus
15 chr13:95919200-95922800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr13:95919400-95923200 Enhancers HSMM muscle
17 chr13:95919400-95923600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr13:95919400-95924200 Enhancers Fetal Stomach stomach
19 chr13:95919600-95923000 Genic enhancers K562 blood
20 chr13:95919600-95923400 Enhancers Osteobl bone
21 chr13:95919600-95924800 Enhancers HUVEC blood vessel
22 chr13:95919800-95922600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr13:95919800-95923600 Weak transcription Primary hematopoietic stem cells blood
24 chr13:95919800-95924600 Enhancers Rectal Smooth Muscle rectum
25 chr13:95919800-95928000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr13:95920000-95923600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr13:95920000-95923600 Weak transcription Duodenum Mucosa Duodenum
28 chr13:95920200-95922400 Enhancers NHEK skin
29 chr13:95920200-95922800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr13:95920200-95923600 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr13:95920200-95928800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr13:95920200-95952800 Weak transcription Aorta Aorta
33 chr13:95920400-95922800 Weak transcription Fetal Intestine Large intestine
34 chr13:95920400-95923000 Enhancers NHDF-Ad bronchial
35 chr13:95920400-95923400 Weak transcription Brain Hippocampus Middle brain
36 chr13:95920400-95923400 Weak transcription HepG2 liver
37 chr13:95920400-95923600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr13:95920400-95924400 Enhancers NH-A brain
39 chr13:95920400-95927400 Weak transcription Hela-S3 cervix
40 chr13:95920600-95922600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr13:95920600-95922600 Weak transcription Pancreas Pancrea
42 chr13:95920600-95922800 Weak transcription Fetal Muscle Leg muscle
43 chr13:95920600-95928200 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr13:95920800-95923200 Enhancers Muscle Satellite Cultured Cells --
45 chr13:95920800-95923400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr13:95920800-95925600 Weak transcription Placenta Placenta
47 chr13:95921000-95922800 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr13:95921000-95923200 Weak transcription Fetal Kidney kidney
49 chr13:95921000-95923600 Enhancers Stomach Smooth Muscle stomach
50 chr13:95921200-95923000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015