Variant report

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT3	chr6:27372189-27372375	MCF10A-Er-Src	breast:	n/a	n/a

No data

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No.	Distal block	Cell Line	Cell type
1	chr6:27363554..27367371-chr6:27369337..27372451,5	K562	blood:
2	chr6:27370730..27373329-chr6:27374910..27376555,2	K562	blood:
3	chr6:27371829..27373336-chr6:27374034..27376555,2	K562	blood:
4	chr6:27363318..27368170-chr6:27368582..27372451,5	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF184-2	chr6:27371789-27374743	ENSG00000271755.1

No data

rSNPs within LD-proxies of this variant (count:7)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948921	chr6:26556890-27443957	Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	472 gene(s)	inside rSNPs	diseases
2	nsv1031803	chr6:27355881-27423655	Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
3	nsv538166	chr6:27355881-27423655	Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
4	nsv5235	chr6:27358498-27404074	ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:27369000-27376600	Weak transcription	Brain Cingulate Gyrus	brain
2	chr6:27369200-27372600	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr6:27369200-27382000	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr6:27369600-27372600	Weak transcription	Fetal Brain Male	brain
5	chr6:27369600-27374200	Weak transcription	Fetal Muscle Trunk	muscle
6	chr6:27369800-27372600	Weak transcription	Brain Hippocampus Middle	brain
7	chr6:27370600-27379800	Weak transcription	Ovary	ovary
8	chr6:27370800-27373800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr6:27370800-27374400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr6:27371200-27373600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr6:27371400-27372800	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr6:27372200-27372400	ZNF genes & repeats	ES-WA7 Cell Line	embryonic stem cell

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