Variant report

Variant rs73390978
Chromosome Location chr22:30130494-30130495
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30117000-30137200 Weak transcription HSMM muscle
2 chr22:30117200-30133800 Weak transcription Right Atrium heart
3 chr22:30123000-30135400 Weak transcription Placenta Amnion Placenta Amnion
4 chr22:30123200-30130600 Weak transcription NH-A brain
5 chr22:30123200-30131800 Weak transcription Brain Cingulate Gyrus brain
6 chr22:30123200-30135800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr22:30123200-30137600 Weak transcription Osteobl bone
8 chr22:30123200-30142800 Weak transcription Brain Substantia Nigra brain
9 chr22:30123600-30133400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr22:30123600-30134000 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr22:30123600-30135600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr22:30123600-30146800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr22:30123600-30147000 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr22:30123800-30130600 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr22:30123800-30136600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr22:30124200-30131000 Strong transcription Brain Germinal Matrix brain
17 chr22:30124600-30133600 Weak transcription Fetal Lung lung
18 chr22:30124600-30136600 Weak transcription Primary B cells from cord blood blood
19 chr22:30124800-30135200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr22:30125000-30135600 Weak transcription Dnd41 blood
21 chr22:30125200-30131600 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr22:30125400-30130600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr22:30125400-30146200 Weak transcription NHLF lung
24 chr22:30125600-30132400 Strong transcription Lung lung
25 chr22:30125800-30132400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
26 chr22:30126000-30144600 Weak transcription H9 Cell Line embryonic stem cell
27 chr22:30126200-30132200 Strong transcription Thymus Thymus
28 chr22:30126400-30130800 Strong transcription Primary T cells fromperipheralblood blood
29 chr22:30126400-30133800 Weak transcription HSMMtube muscle
30 chr22:30126600-30131400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr22:30126600-30145200 Strong transcription Primary T cells from cord blood blood
32 chr22:30126800-30131800 Strong transcription Primary T regulatory cells fromperipheralblood blood
33 chr22:30127400-30131800 Weak transcription Brain Inferior Temporal Lobe brain
34 chr22:30127600-30133400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr22:30127600-30134400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr22:30127600-30140600 Weak transcription Muscle Satellite Cultured Cells --
37 chr22:30127800-30135400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr22:30127800-30137200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr22:30128200-30131000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr22:30128200-30133800 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr22:30128200-30136200 Weak transcription Small Intestine intestine
42 chr22:30128400-30135600 Weak transcription HepG2 liver
43 chr22:30128800-30131000 Enhancers Primary hematopoietic stem cells blood
44 chr22:30129000-30130800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr22:30129000-30131000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr22:30129000-30131200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr22:30129000-30131600 Genic enhancers Fetal Adrenal Gland Adrenal Gland
48 chr22:30129000-30131800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr22:30129000-30132400 Strong transcription Gastric stomach
50 chr22:30129000-30139200 Strong transcription Stomach Smooth Muscle stomach

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