Variant report

Variant	rs73420365
Chromosome Location	chr12:124252641-124252642
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10450701	1.00[AMR][1000 genomes]
rs57988149	1.00[AMR][1000 genomes]
rs60567004	1.00[AMR][1000 genomes]
rs60619560	1.00[AMR][1000 genomes]
rs73416222	1.00[AMR][1000 genomes]
rs73416238	1.00[AMR][1000 genomes]
rs73416287	1.00[AMR][1000 genomes]
rs73416290	1.00[AMR][1000 genomes]
rs73418112	1.00[AMR][1000 genomes]
rs73420329	1.00[AMR][1000 genomes]
rs73420332	1.00[AMR][1000 genomes]
rs73420336	1.00[AMR][1000 genomes]
rs73420342	1.00[AMR][1000 genomes]
rs73420356	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498024	chr12:123994372-124459856	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	63 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:124244800-124254800	Weak transcription	HSMMtube	muscle
2	chr12:124251800-124252800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr12:124251800-124253200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
4	chr12:124252000-124252800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
5	chr12:124252000-124252800	Flanking Active TSS	GM12878-XiMat	blood
6	chr12:124252000-124252800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
7	chr12:124252200-124252800	Enhancers	Primary B cells from peripheral blood	blood
8	chr12:124252600-124253000	Enhancers	Primary hematopoietic stem cells	blood
9	chr12:124252600-124253200	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr12:124252600-124253400	Enhancers	Primary neutrophils fromperipheralblood	blood
11	chr12:124252600-124253600	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr12:124252600-124253600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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