Variant report

Variant	rs73422933
Chromosome Location	chr11:15621304-15621305
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs16931632	0.95[AFR][1000 genomes]
rs1986627	1.00[EUR][1000 genomes]
rs2200309	0.95[AFR][1000 genomes]
rs2351059	0.96[AFR][1000 genomes]
rs7111186	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv469886	chr11:15615503-15785943	Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv482658	chr11:15615503-15785943	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15611000-15626800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:15613600-15626000	Weak transcription	Right Ventricle	heart
3	chr11:15616600-15624800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr11:15618000-15623800	Weak transcription	Left Ventricle	heart
5	chr11:15618400-15621400	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr11:15618600-15624000	Weak transcription	Right Atrium	heart
7	chr11:15620800-15623600	Weak transcription	Brain Germinal Matrix	brain
8	chr11:15621000-15623400	Weak transcription	Fetal Intestine Small	intestine

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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