The 2.0 version of rSNPBase

Variant report

Variant rs73425184
Chromosome Location chr18:43815653-43815654
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:43796600-43820000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr18:43796600-43827600 Weak transcription Fetal Muscle Leg muscle
3 chr18:43797000-43820000 Weak transcription Ovary ovary
4 chr18:43797000-43833400 Weak transcription Fetal Muscle Trunk muscle
5 chr18:43797400-43829600 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr18:43798800-43833800 Weak transcription HepG2 liver
7 chr18:43799000-43834000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr18:43800800-43829000 Weak transcription HSMM muscle
9 chr18:43801200-43829600 Weak transcription Thymus Thymus
10 chr18:43802800-43828200 Weak transcription Primary B cells from peripheral blood blood
11 chr18:43802800-43830000 Weak transcription Brain Substantia Nigra brain
12 chr18:43803000-43820000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr18:43803600-43827800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr18:43803800-43820000 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr18:43804400-43820000 Weak transcription Primary monocytes fromperipheralblood blood
16 chr18:43804400-43820000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr18:43804400-43825200 Weak transcription Hela-S3 cervix
18 chr18:43804600-43825200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr18:43804800-43829400 Weak transcription Primary hematopoietic stem cells blood
20 chr18:43805200-43828200 Weak transcription GM12878-XiMat blood
21 chr18:43805400-43827600 Weak transcription Fetal Thymus thymus
22 chr18:43805400-43829800 Weak transcription Fetal Intestine Large intestine
23 chr18:43805600-43820000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr18:43805600-43826200 Weak transcription Fetal Stomach stomach
25 chr18:43806200-43826200 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr18:43806400-43827600 Weak transcription Duodenum Mucosa Duodenum
27 chr18:43806400-43829000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr18:43806800-43818000 Weak transcription Osteobl bone
29 chr18:43807400-43818200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr18:43808200-43828800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr18:43810000-43829000 Weak transcription Esophagus oesophagus
32 chr18:43810200-43821400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr18:43810200-43825200 Weak transcription Primary T cells fromperipheralblood blood
34 chr18:43810200-43828000 Weak transcription Lung lung
35 chr18:43810200-43829400 Weak transcription Fetal Intestine Small intestine
36 chr18:43810200-43832400 Weak transcription Aorta Aorta
37 chr18:43810400-43827800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr18:43812200-43816800 Enhancers Primary T helper cells PMA-I stimulated --
39 chr18:43814400-43815800 Strong transcription Primary B cells from cord blood blood
40 chr18:43814400-43815800 Enhancers Primary T cells from cord blood blood
41 chr18:43814400-43816000 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr18:43814600-43815800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr18:43814600-43815800 Enhancers Stomach Mucosa stomach
44 chr18:43814600-43816000 Enhancers Brain Anterior Caudate brain
45 chr18:43814600-43816400 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr18:43814600-43816400 Enhancers NHEK skin
47 chr18:43814800-43815800 Enhancers Primary T killer naive cells fromperipheralblood blood
48 chr18:43815000-43815800 Enhancers Primary T helper naive cells from peripheral blood blood
49 chr18:43815000-43815800 Enhancers Rectal Smooth Muscle rectum
50 chr18:43815200-43815800 Enhancers Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015