Variant report

Variant	rs73426968
Chromosome Location	chr11:15820584-15820585
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1920679	0.93[AFR][1000 genomes]
rs58338745	1.00[AMR][1000 genomes]
rs58935165	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7128933	1.00[AMR][1000 genomes]
rs73426958	0.89[AFR][1000 genomes]
rs73426960	0.91[AFR][1000 genomes]
rs7927447	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051187	chr11:15781277-15846536	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv1037145	chr11:15818508-15830938	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15813800-15828800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:15815800-15821200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr11:15816200-15820800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr11:15816200-15821400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr11:15816400-15821200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr11:15816400-15821200	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr11:15816400-15821200	Weak transcription	Osteobl	bone
8	chr11:15816400-15821600	Weak transcription	HSMM	muscle
9	chr11:15816600-15821400	Weak transcription	NH-A	brain
10	chr11:15817200-15821600	Weak transcription	Right Ventricle	heart
11	chr11:15817400-15821400	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr11:15820200-15821600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr11:15820400-15821400	Enhancers	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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