Variant report

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TCF12	chr15:62123184-62124215	ECC-1	luminal epithelium:	n/a	n/a

No data

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No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:61993548..61996478-chr15:62124062..62125855,2	MCF-7	breast:
2	chr15:62114335..62116359-chr15:62122402..62125286,2	K562	blood:

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No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-VPS13C-2	chr15:62123916-62124203	NONHSAT044258
2	lnc-VPS13C-2	chr15:62123916-62124203	FPKM1_group_10292_transcript_1

No data

Variant related genes	Relation type
ENSG00000259564	TF binding region

rSNPs within LD-proxies of this variant (count:3)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv904284	chr15:62123600-62243197	Weak transcription Enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:62121800-62126600	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr15:62122400-62124200	Enhancers	Primary hematopoietic stem cells	blood
3	chr15:62122600-62124200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr15:62123000-62124200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr15:62123000-62124200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr15:62123000-62124400	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr15:62123400-62124200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr15:62123400-62124200	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr15:62123400-62124200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
10	chr15:62123400-62124400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr15:62123400-62124600	Enhancers	Primary hematopoietic stem cells short term culture	blood
12	chr15:62123400-62126400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
13	chr15:62123600-62124200	Enhancers	HUES48 Cell Line	embryonic stem cell
14	chr15:62123600-62124200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr15:62124000-62124200	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr15:62124000-62126000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood

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