Variant report

Variant	rs73428905
Chromosome Location	chr11:15846392-15846393
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs58338745	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051187	chr11:15781277-15846536	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv832073	chr11:15822409-15984078	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:15829800-15848000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:15838800-15847000	Weak transcription	Pancreas	Pancrea
3	chr11:15838800-15848000	Weak transcription	Left Ventricle	heart
4	chr11:15839400-15850200	Weak transcription	Aorta	Aorta
5	chr11:15839800-15847400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr11:15841600-15848600	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr11:15841800-15848600	Weak transcription	Right Atrium	heart
8	chr11:15841800-15849200	Weak transcription	Adipose Nuclei	Adipose
9	chr11:15841800-15849600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr11:15843200-15847000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr11:15845000-15848400	Enhancers	NH-A	brain
12	chr11:15845600-15846600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr11:15846000-15847200	Weak transcription	Brain Germinal Matrix	brain
14	chr11:15846200-15847600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr11:15846200-15847600	Weak transcription	Osteobl	bone

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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