Variant report

Variant	rs73440149
Chromosome Location	chr18:44849407-44849408
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs2668783	1.00[ASN][1000 genomes]
rs2684817	1.00[ASN][1000 genomes]
rs73426041	1.00[ASN][1000 genomes]
rs73428055	0.90[AFR][1000 genomes]
rs73428065	1.00[AMR][1000 genomes]
rs73428067	1.00[AMR][1000 genomes]
rs73428073	1.00[AMR][1000 genomes]
rs73440143	0.95[AFR][1000 genomes]
rs73440153	0.92[AFR][1000 genomes]
rs73440159	0.85[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833641	chr18:44815063-45020202	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44839800-44858400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr18:44849400-44850000	Enhancers	Muscle Satellite Cultured Cells	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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