Variant report

Variant	rs73443977
Chromosome Location	chr18:45502215-45502216
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs59507785	1.00[AMR][1000 genomes]
rs59530257	1.00[AMR][1000 genomes]
rs73443975	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv909616	chr18:45467806-45844500	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:45498000-45502800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr18:45498800-45502600	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr18:45498800-45502600	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr18:45499000-45503400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr18:45500200-45503000	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr18:45501000-45502600	Enhancers	H1 Cell Line	embryonic stem cell
7	chr18:45501000-45502600	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr18:45501200-45502400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr18:45501200-45502600	Enhancers	Primary B cells from cord blood	blood
10	chr18:45501400-45502800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr18:45501600-45502400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr18:45501600-45503000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr18:45501800-45502400	Weak transcription	Placenta	Placenta
14	chr18:45501800-45510200	Weak transcription	H9 Cell Line	embryonic stem cell
15	chr18:45502000-45502400	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr18:45502000-45502400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr18:45502000-45502400	Enhancers	Dnd41	blood
18	chr18:45502000-45502600	Enhancers	Primary B cells from peripheral blood	blood
19	chr18:45502200-45502400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
20	chr18:45502200-45502400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr18:45502200-45502400	Enhancers	Primary hematopoietic stem cells short term culture	blood
22	chr18:45502200-45503400	Enhancers	Hela-S3	cervix
23	chr18:45502200-45510000	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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