Variant report

Variant	rs73453851
Chromosome Location	chr9:73375301-73375302
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs61110890	0.85[AFR][1000 genomes]
rs73460930	0.83[AFR][1000 genomes]
rs73465672	0.83[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893440	chr9:73225802-73434585	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	76 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73356800-73376000	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr9:73367000-73376600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr9:73369000-73378000	Weak transcription	Aorta	Aorta
4	chr9:73369200-73377000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr9:73369200-73390200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr9:73374600-73375600	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
7	chr9:73374600-73377200	Weak transcription	Brain Cingulate Gyrus	brain
8	chr9:73375000-73376400	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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