Variant report

Variant	rs73467850
Chromosome Location	chr6:69464233-69464234
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs56892941	1.00[AMR][1000 genomes]
rs73461954	0.84[AFR][1000 genomes]
rs73461958	0.81[AFR][1000 genomes]
rs73461973	0.86[AFR][1000 genomes]
rs73461984	0.88[AFR][1000 genomes]
rs73463909	0.92[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886130	chr6:68950298-69531957	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69452600-69464800	Weak transcription	Fetal Lung	lung
2	chr6:69457400-69466000	Weak transcription	Fetal Brain Female	brain
3	chr6:69457400-69466400	Weak transcription	Brain Anterior Caudate	brain
4	chr6:69461000-69464600	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr6:69461000-69465400	Weak transcription	Brain Angular Gyrus	brain
6	chr6:69461200-69465000	Weak transcription	Brain Cingulate Gyrus	brain
7	chr6:69463400-69470800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr6:69464000-69469000	Enhancers	Brain Substantia Nigra	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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