Variant report

Variant	rs73475120
Chromosome Location	chr7:147125384-147125385
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs58307467	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6967847	1.00[AMR][1000 genomes]
rs73457452	1.00[AMR][1000 genomes]
rs73459461	1.00[AMR][1000 genomes]
rs73459464	1.00[AMR][1000 genomes]
rs73459467	1.00[AMR][1000 genomes]
rs73475122	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73475124	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73475134	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73475137	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv608954	chr7:147104887-147145576	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a
3	nsv1024540	chr7:147105149-147138125	Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147123200-147128200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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