Variant report

Variant	rs73476353
Chromosome Location	chr6:81601693-81601694
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs6940338	1.00[AMR][1000 genomes]
rs73463306	1.00[AMR][1000 genomes]
rs73463330	1.00[AMR][1000 genomes]
rs73463349	1.00[AMR][1000 genomes]
rs73463361	1.00[AMR][1000 genomes]
rs73463382	1.00[AMR][1000 genomes]
rs73465305	1.00[AMR][1000 genomes]
rs73476343	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73478111	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73478117	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73478119	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73480179	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73482319	1.00[AMR][1000 genomes]
rs73482322	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531333	chr6:81042427-81836484	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv886315	chr6:81352515-81946866	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv886318	chr6:81447367-81769538	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv517853	chr6:81529339-81607383	Enhancers ZNF genes & repeats Active TSS	n/a	n/a	inside rSNPs	diseases
5	nsv1020546	chr6:81536002-81616792	Enhancers ZNF genes & repeats Weak transcription Active TSS	n/a	n/a	inside rSNPs	diseases
6	esv2763957	chr6:81567637-81656379	Enhancers ZNF genes & repeats Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv1032130	chr6:81572030-81722231	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv1022379	chr6:81585449-81621295	Enhancers ZNF genes & repeats Weak transcription	n/a	n/a	inside rSNPs	diseases
9	nsv432936	chr6:81588549-81632422	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
10	nsv981305	chr6:81592006-81606329	Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv2762604	chr6:81593275-81742093	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv516497	chr6:81596450-81615591	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:81600600-81601800	Enhancers	Dnd41	blood
2	chr6:81601400-81601800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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