Variant report

Variant	rs73480772
Chromosome Location	chr18:40286344-40286345
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs16976547	1.00[AFR][1000 genomes]
rs58120519	1.00[AFR][1000 genomes]
rs61108347	0.88[AFR][1000 genomes]
rs7230940	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3447158	chr18:40045478-40320720	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv833632	chr18:40187679-40388058	Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1056794	chr18:40197837-40688514	Flanking Active TSS Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:40285200-40288200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr18:40286000-40286600	Flanking Active TSS	Dnd41	blood
3	chr18:40286000-40286800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr18:40286000-40287400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr18:40286200-40286600	Active TSS	Breast Myoepithelial Primary Cells	Breast
6	chr18:40286200-40286600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr18:40286200-40286600	Enhancers	Stomach Smooth Muscle	stomach
8	chr18:40286200-40286800	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr18:40286200-40286800	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr18:40286200-40286800	Flanking Active TSS	HMEC	breast
11	chr18:40286200-40286800	Flanking Active TSS	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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