Variant report

Variant	rs73481551
Chromosome Location	chr7:129226346-129226347
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs73464611	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73464626	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73464639	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73464641	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73464643	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73481552	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73481553	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831128	chr7:129063040-129240800	Weak transcription Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:129219200-129227600	Weak transcription	HSMMtube	muscle
2	chr7:129224000-129226800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:129225200-129227400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
4	chr7:129225800-129226600	Flanking Active TSS	A549	lung
5	chr7:129226000-129226400	Enhancers	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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