The 2.0 version of rSNPBase

Variant report

Variant rs73487868
Chromosome Location chr11:62636211-62636212
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:62624200-62646800 Weak transcription Stomach Smooth Muscle stomach
2 chr11:62624400-62638400 Weak transcription Fetal Stomach stomach
3 chr11:62624400-62646800 Weak transcription Osteobl bone
4 chr11:62624600-62639600 Weak transcription Fetal Intestine Large intestine
5 chr11:62624600-62645600 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr11:62625000-62646800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr11:62625200-62640800 Weak transcription Fetal Muscle Leg muscle
8 chr11:62625400-62644800 Weak transcription Thymus Thymus
9 chr11:62625400-62646400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr11:62625600-62646400 Weak transcription Muscle Satellite Cultured Cells --
11 chr11:62625800-62646800 Weak transcription Duodenum Mucosa Duodenum
12 chr11:62626000-62640600 Weak transcription Fetal Muscle Trunk muscle
13 chr11:62627400-62639200 Weak transcription Brain Germinal Matrix brain
14 chr11:62627600-62643600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr11:62629000-62639400 Weak transcription Fetal Intestine Small intestine
16 chr11:62629000-62646600 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr11:62629800-62644800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr11:62630000-62640600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr11:62630200-62639600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr11:62630200-62640800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr11:62630200-62642400 Weak transcription Placenta Placenta
22 chr11:62630200-62646800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr11:62630200-62646800 Weak transcription Primary hematopoietic stem cells blood
24 chr11:62630200-62647000 Weak transcription HUVEC blood vessel
25 chr11:62630400-62640400 Weak transcription Fetal Thymus thymus
26 chr11:62630400-62647000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr11:62630400-62647000 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr11:62630600-62639400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr11:62630600-62641600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr11:62630800-62647200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr11:62630800-62648400 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr11:62631000-62639000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr11:62631000-62646000 Strong transcription H1 Cell Line embryonic stem cell
34 chr11:62631400-62643400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr11:62631400-62643400 Weak transcription GM12878-XiMat blood
36 chr11:62631400-62646800 Weak transcription HSMM muscle
37 chr11:62631600-62638400 Weak transcription H9 Cell Line embryonic stem cell
38 chr11:62631600-62639800 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr11:62631600-62644200 Weak transcription NHEK skin
40 chr11:62631600-62644800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr11:62631600-62645000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr11:62631600-62646400 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr11:62631600-62646800 Strong transcription iPS-20b Cell Line embryonic stem cell
44 chr11:62631600-62647000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr11:62631600-62648200 Weak transcription Placenta Amnion Placenta Amnion
46 chr11:62631800-62639600 Weak transcription Fetal Brain Female brain
47 chr11:62631800-62640400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr11:62631800-62643400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr11:62633400-62639600 Weak transcription Hela-S3 cervix
50 chr11:62633400-62639800 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015