Variant report

Variant	rs73490466
Chromosome Location	chrX:55101399-55101400
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:11)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:11 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chrX:55101342-55101637	A549	lung:	n/a	n/a
2	E2F6	chrX:55101321-55101552	K562	blood:	n/a	n/a
3	CTCF	chrX:55101372-55101517	K562	blood:	n/a	n/a
4	MAX	chrX:55101171-55101613	K562	blood:	n/a	chrX:55101248-55101258
5	NRF1	chrX:55101314-55101514	K562	blood:	n/a	chrX:55101439-55101450
6	BHLHE40	chrX:55101355-55101514	K562	blood:	n/a	n/a
7	MAX	chrX:55101297-55101558	K562	blood:	n/a	n/a
8	YY1	chrX:55101363-55101630	K562	blood:	n/a	chrX:55101508-55101516 chrX:55101507-55101529 chrX:55101510-55101518 chrX:55101507-55101517 chrX:55101505-55101524
9	CBX3	chrX:55101260-55101617	K562	blood:	n/a	n/a
10	CTCF	chrX:55101373-55101429	Fibrobl	skin:	n/a	n/a
11	MAX	chrX:55101352-55101514	K562	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chrX:55101351-55101401	GM06990	blood:	n/a
2	chrX:55101351-55101401	A549	lung:	n/a
3	chrX:55101351-55101401	ECC-1	luminal epithelium:	n/a
4	chrX:55101351-55101401	AG04449	skin:	fetal
5	chrX:55101351-55101401	HepG2	liver:	n/a
6	chrX:55101351-55101401	ProgFib	skin:	n/a
7	chrX:55101351-55101401	PrEC	prostate:	n/a
8	chrX:55101351-55101401	SK-N-SH	brain:	n/a
9	chrX:55101351-55101401	HCF	heart:	n/a
10	chrX:55101351-55101401	HRPEpiC	eye:	n/a
11	chrX:55101351-55101401	GM12878	blood:	n/a
12	chrX:55101351-55101401	HNPCEpiC	eye:	n/a
13	chrX:55101351-55101401	HCPEpiC	choroid plexus:	n/a
14	chrX:55101351-55101401	NHDF-neo	bronchial:	n/a
15	chrX:55101351-55101401	HRCEpiC	kidney:	n/a
16	chrX:55101351-55101401	HL-60	blood:	n/a
17	chrX:55101351-55101401	RPTEC	kidney:	n/a
18	chrX:55101351-55101401	SK-N-SH_RA	brain:	n/a
19	chrX:55101351-55101401	HPAEpiC	pulmonary alveolar:	n/a
20	chrX:55101351-55101401	AoSMC	blood vessel:	n/a
21	chrX:55101351-55101401	SK-N-MC	brain:	n/a
22	chrX:55101351-55101401	MCF-7	breast:	n/a
23	chrX:55101351-55101401	AG09309	skin:	n/a
24	chrX:55101351-55101401	K562	blood:	n/a
25	chrX:55101351-55101401	AG09319	gingival:	n/a
26	chrX:55101351-55101401	HEEpiC	esophagus:	n/a
27	chrX:55101351-55101401	HEK293	kidney:	embryo
28	chrX:55101351-55101401	U87	brain:	n/a
29	chrX:55101351-55101401	Caco-2	colon:	n/a
30	chrX:55101351-55101401	HUVEC	blood vessel:	n/a
31	chrX:55101351-55101401	H1-hESC	embryonic stem cell:	embryo
32	chrX:55101351-55101401	HCT-116	colon:	n/a
33	chrX:55101351-55101401	LNCaP	prostate:	n/a
34	chrX:55101351-55101401	IMR90	lung:	fetal
35	chrX:55101351-55101401	ovcar-3	ovarian:	n/a
36	chrX:55101351-55101401	HCM	heart:	n/a
37	chrX:55101351-55101401	MCF10A-Er-Src	breast:	n/a
38	chrX:55101351-55101401	HAEpiC	amniotic membrane:	n/a
39	chrX:55101351-55101401	Jurkat	blood:	n/a
40	chrX:55101351-55101401	BJ	skin:	n/a
41	chrX:55101351-55101401	CMK	blood:	n/a
42	chrX:55101351-55101401	AG04450	lung:	fetal
43	chrX:55101351-55101401	GM12892	blood:	n/a
44	chrX:55101351-55101401	AG10803	skin:	n/a
45	chrX:55101351-55101401	HRE	kidney:	n/a
46	chrX:55101351-55101401	Hela-S3	cervix:	n/a
47	chrX:55101351-55101401	GM19239	blood:	n/a
48	chrX:55101351-55101401	PFSK-1	brain:	n/a
49	chrX:55101351-55101401	T-47D	breast:	n/a
50	chrX:55101351-55101401	NHBE	bronchial:	n/a

No data

Variant related genes	Relation type
PAGE2B	TF binding region
PAGE2B	CpG island

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv19730	chrX:55086753-55121905	Enhancers Bivalent Enhancer	TF binding region CpG island	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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