Variant report

(count:2 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BHLHE40	chr11:75475593-75475884	K562	blood:	n/a	n/a
2	ZNF263	chr11:75475517-75475745	HEK293-T-REx	kidney:	n/a	n/a

No data

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:75465856..75467458-chr11:75474012..75476887,2	K562	blood:
2	chr11:75475566..75477498-chr11:75506229..75507930,2	MCF-7	breast:
3	chr11:75473903..75476116-chr11:75525197..75528135,2	K562	blood:
4	chr11:75474947..75476631-chr11:75479076..75481946,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MAP6-2	chr11:75475288-75476038	ENSG00000247867
2	lnc-MAP6-2	chr11:75475288-75476038	XLOC_009505

No data

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs73504529	0.88[ASN][1000 genomes]
rs73504542	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73504545	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3381903	chr11:75123498-75587233	Bivalent Enhancer Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	81 gene(s)	inside rSNPs	diseases
2	nsv897924	chr11:75424546-75678647	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
3	nsv897925	chr11:75456134-75556323	Active TSS Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:75466200-75475800	Enhancers	Liver	Liver
2	chr11:75470200-75476200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr11:75472000-75476600	Enhancers	Adipose Nuclei	Adipose
4	chr11:75472400-75477000	Weak transcription	GM12878-XiMat	blood
5	chr11:75472600-75478600	Weak transcription	Fetal Intestine Small	intestine
6	chr11:75473400-75476000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr11:75473400-75478400	Weak transcription	Lung	lung
8	chr11:75473600-75475800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr11:75474600-75477400	Weak transcription	NHDF-Ad	bronchial
10	chr11:75474800-75475800	Enhancers	Primary neutrophils fromperipheralblood	blood
11	chr11:75474800-75479000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr11:75475200-75478200	Weak transcription	Spleen	Spleen
13	chr11:75475200-75479000	Weak transcription	Pancreas	Pancrea
14	chr11:75475400-75476200	Weak transcription	HepG2	liver
15	chr11:75475400-75477200	Weak transcription	Monocytes-CD14+_RO01746	blood
16	chr11:75475600-75477000	Weak transcription	Primary monocytes fromperipheralblood	blood
17	chr11:75475600-75477800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr11:75475600-75479200	Weak transcription	HMEC	breast

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