The 2.0 version of rSNPBase

Variant report

Variant rs73505472
Chromosome Location chr11:34179432-34179433
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34130000-34181800 Strong transcription A549 lung
2 chr11:34138800-34185600 Strong transcription Fetal Brain Female brain
3 chr11:34146200-34187600 Strong transcription Cortex derived primary cultured neurospheres brain
4 chr11:34152200-34184800 Strong transcription Brain Germinal Matrix brain
5 chr11:34152400-34186600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr11:34165800-34184600 Weak transcription Stomach Mucosa stomach
7 chr11:34166800-34182400 Weak transcription Psoas Muscle Psoas
8 chr11:34169600-34196200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr11:34170200-34183400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr11:34170800-34182000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr11:34171400-34180000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr11:34171400-34180800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr11:34172400-34185200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr11:34172600-34180000 Weak transcription Primary T cells fromperipheralblood blood
15 chr11:34172600-34190400 Strong transcription Fetal Intestine Small intestine
16 chr11:34172800-34180200 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr11:34173000-34182400 Strong transcription Fetal Muscle Leg muscle
18 chr11:34173000-34182400 Strong transcription Placenta Placenta
19 chr11:34173000-34183600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr11:34173200-34180000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr11:34173200-34195600 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr11:34173400-34189400 Strong transcription HSMMtube muscle
23 chr11:34173800-34180400 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr11:34173800-34185000 Strong transcription Duodenum Mucosa Duodenum
25 chr11:34174400-34184000 Weak transcription Fetal Intestine Large intestine
26 chr11:34174400-34190800 Weak transcription Colonic Mucosa Colon
27 chr11:34174600-34193400 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr11:34175400-34187400 Weak transcription HMEC breast
29 chr11:34176000-34179800 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr11:34176000-34181200 Weak transcription Pancreas Pancrea
31 chr11:34176000-34186600 Weak transcription Esophagus oesophagus
32 chr11:34176400-34180400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr11:34176400-34182600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr11:34176400-34183200 Weak transcription K562 blood
35 chr11:34176600-34183400 Weak transcription Muscle Satellite Cultured Cells --
36 chr11:34176600-34188600 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr11:34176800-34180000 Weak transcription HepG2 liver
38 chr11:34176800-34180200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr11:34176800-34181200 Weak transcription Primary B cells from cord blood blood
40 chr11:34176800-34184800 Weak transcription Primary monocytes fromperipheralblood blood
41 chr11:34176800-34187400 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr11:34176800-34195600 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr11:34177000-34180000 Weak transcription Primary hematopoietic stem cells blood
44 chr11:34177000-34180000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr11:34177000-34196200 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr11:34177200-34184200 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr11:34177200-34190200 Strong transcription Primary neutrophils fromperipheralblood blood
48 chr11:34177400-34180000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr11:34177400-34180200 Weak transcription Osteobl bone
50 chr11:34177400-34187200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015