Variant report

Variant	rs73514305
Chromosome Location	chr6:72175974-72175975
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs55765851	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58258982	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830684	chr6:72094842-72282684	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	488 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:72174000-72176400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr6:72175600-72176000	Enhancers	NHEK	skin
3	chr6:72175600-72176600	Enhancers	HMEC	breast
4	chr6:72175800-72176000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
5	chr6:72175800-72176200	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr6:72175800-72176600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr6:72175800-72176600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr6:72175800-72177600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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