Variant report

Variant	rs73531690
Chromosome Location	chr6:110365787-110365788
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs6939552	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73531700	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73533819	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1017642	chr6:110252276-110386453	Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv538417	chr6:110252276-110386453	Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:110361600-110366600	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr6:110364000-110366000	Enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr6:110364000-110366000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr6:110364200-110365800	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr6:110364200-110366000	Enhancers	Primary hematopoietic stem cells	blood
6	chr6:110364200-110366000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr6:110364800-110366000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr6:110365000-110366000	Enhancers	Placenta	Placenta
9	chr6:110365200-110365800	Enhancers	NHEK	skin
10	chr6:110365200-110366000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr6:110365400-110365800	Enhancers	Fetal Thymus	thymus
12	chr6:110365400-110365800	Enhancers	HMEC	breast
13	chr6:110365400-110366000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr6:110365400-110367000	Enhancers	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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