Variant report

Variant	rs73532270
Chromosome Location	chr16:31264342-31264343
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs57108507	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431451	chr16:30682399-31340999	Transcr. at gene 5' and 3' Genic enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	350 gene(s)	inside rSNPs	diseases
2	nsv1066073	chr16:31219071-31278572	Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:31260400-31265000	Weak transcription	NHEK	skin
2	chr16:31261200-31264400	Enhancers	Primary neutrophils fromperipheralblood	blood
3	chr16:31261200-31264600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr16:31262800-31264400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr16:31262800-31265000	Weak transcription	Primary T cells fromperipheralblood	blood
6	chr16:31262800-31265000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr16:31262800-31265200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
8	chr16:31262800-31271800	Weak transcription	Primary T helper cells PMA-I stimulated	--
9	chr16:31263000-31265000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
10	chr16:31263000-31271000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr16:31263400-31268400	Enhancers	Primary monocytes fromperipheralblood	blood
12	chr16:31264000-31265000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr16:31264000-31265000	Enhancers	K562	blood
14	chr16:31264200-31265000	Enhancers	Primary B cells from cord blood	blood
15	chr16:31264200-31265000	Enhancers	A549	lung
16	chr16:31264200-31265400	Enhancers	Fetal Intestine Large	intestine
17	chr16:31264200-31265600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
18	chr16:31264200-31268200	Enhancers	Primary hematopoietic stem cells short term culture	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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