The 2.0 version of rSNPBase

Variant report

Variant rs73540491
Chromosome Location chr15:92669598-92669599
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:92643800-92676000 Strong transcription Primary monocytes fromperipheralblood blood
2 chr15:92645000-92679800 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr15:92645200-92705600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr15:92648200-92692600 Weak transcription NHLF lung
5 chr15:92649000-92671400 Weak transcription Colonic Mucosa Colon
6 chr15:92649200-92710800 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr15:92657000-92690200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr15:92660600-92678600 Weak transcription Thymus Thymus
9 chr15:92661000-92670400 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr15:92661000-92703600 Weak transcription Small Intestine intestine
11 chr15:92662200-92673400 Weak transcription HMEC breast
12 chr15:92662200-92673800 Weak transcription NHEK skin
13 chr15:92663000-92677200 Strong transcription Primary T regulatory cells fromperipheralblood blood
14 chr15:92663200-92670200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr15:92663200-92671000 Strong transcription Primary T cells fromperipheralblood blood
16 chr15:92663400-92672800 Strong transcription Primary T helper cells PMA-I stimulated --
17 chr15:92663400-92677600 Strong transcription Primary neutrophils fromperipheralblood blood
18 chr15:92663400-92679200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
19 chr15:92663400-92679400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
20 chr15:92663600-92676200 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr15:92664000-92670000 Weak transcription Fetal Muscle Trunk muscle
22 chr15:92664000-92707000 Weak transcription Liver Liver
23 chr15:92664000-92712000 Weak transcription Psoas Muscle Psoas
24 chr15:92664400-92675200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr15:92664600-92673400 Weak transcription Fetal Lung lung
26 chr15:92664600-92675400 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr15:92665200-92689000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr15:92665600-92671200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr15:92665800-92669800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr15:92665800-92670000 Weak transcription Duodenum Mucosa Duodenum
31 chr15:92665800-92670200 Weak transcription Pancreas Pancrea
32 chr15:92665800-92671200 Weak transcription Gastric stomach
33 chr15:92665800-92672800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr15:92665800-92673400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr15:92665800-92673400 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr15:92665800-92676600 Weak transcription Rectal Smooth Muscle rectum
37 chr15:92665800-92682400 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr15:92665800-92686000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr15:92666000-92670200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr15:92666000-92672000 Weak transcription Primary hematopoietic stem cells blood
41 chr15:92666000-92685600 Weak transcription Fetal Muscle Leg muscle
42 chr15:92666000-92704200 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr15:92666400-92669800 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr15:92666400-92670600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr15:92666400-92671800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr15:92666800-92669600 Enhancers Brain Inferior Temporal Lobe brain
47 chr15:92666800-92674000 Strong transcription Esophagus oesophagus
48 chr15:92667000-92674400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
49 chr15:92667000-92675400 Strong transcription Aorta Aorta
50 chr15:92667200-92679200 Strong transcription Lung lung

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Last update: Aug 31, 2015